Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC18.31■□□□□ 0.52
USP8P40818 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC18.31■□□□□ 0.52
USP8P40818 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.31■□□□□ 0.52
USP8P40818 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.31■□□□□ 0.52
USP8P40818 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.31■□□□□ 0.52
USP8P40818 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
USP8P40818 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.31■□□□□ 0.52
USP8P40818 AC021087.4-201ENST00000563761 564 ntBASIC18.31■□□□□ 0.52
USP8P40818 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.31■□□□□ 0.52
USP8P40818 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC18.31■□□□□ 0.52
USP8P40818 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.31■□□□□ 0.52
USP8P40818 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC18.31■□□□□ 0.52
USP8P40818 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
USP8P40818 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC18.31■□□□□ 0.52
USP8P40818 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
USP8P40818 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
USP8P40818 MYB-242ENST00000618728 3545 ntTSL 5 BASIC18.31■□□□□ 0.52
USP8P40818 AC243591.1-201ENST00000452967 1364 ntBASIC18.3■□□□□ 0.52
USP8P40818 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
USP8P40818 AC092171.3-201ENST00000610122 2651 ntBASIC18.3■□□□□ 0.52
USP8P40818 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.3■□□□□ 0.52
USP8P40818 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.3■□□□□ 0.52
USP8P40818 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 AC078925.2-201ENST00000624013 1973 ntBASIC18.3■□□□□ 0.52
USP8P40818 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.3■□□□□ 0.52
USP8P40818 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.3■□□□□ 0.52
USP8P40818 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.3■□□□□ 0.52
USP8P40818 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC18.3■□□□□ 0.52
USP8P40818 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.3■□□□□ 0.52
USP8P40818 DUSP5P1-201ENST00000441325 1139 ntBASIC18.3■□□□□ 0.52
USP8P40818 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
USP8P40818 EMBP1-201ENST00000458200 901 ntBASIC18.3■□□□□ 0.52
USP8P40818 PAM16-208ENST00000573553 722 ntTSL 2 BASIC18.3■□□□□ 0.52
USP8P40818 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.3■□□□□ 0.52
USP8P40818 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
USP8P40818 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC18.3■□□□□ 0.52
USP8P40818 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.3■□□□□ 0.52
USP8P40818 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.3■□□□□ 0.52
USP8P40818 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
USP8P40818 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
USP8P40818 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
USP8P40818 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
USP8P40818 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
USP8P40818 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
USP8P40818 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC18.29■□□□□ 0.52
USP8P40818 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
USP8P40818 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.29■□□□□ 0.52
USP8P40818 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP8P40818 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP8P40818 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
USP8P40818 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP8P40818 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
USP8P40818 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP8P40818 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
USP8P40818 RAB17-203ENST00000409576 466 ntTSL 3 BASIC18.29■□□□□ 0.52
USP8P40818 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.29■□□□□ 0.52
USP8P40818 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.29■□□□□ 0.52
USP8P40818 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC18.29■□□□□ 0.52
USP8P40818 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC18.29■□□□□ 0.52
USP8P40818 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.29■□□□□ 0.52
USP8P40818 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.29■□□□□ 0.52
USP8P40818 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.29■□□□□ 0.52
USP8P40818 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.29■□□□□ 0.52
USP8P40818 AL139424.1-201ENST00000607572 797 ntBASIC18.29■□□□□ 0.52
USP8P40818 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC18.29■□□□□ 0.52
USP8P40818 TK2-221ENST00000620035 5060 ntTSL 2 BASIC18.29■□□□□ 0.52
USP8P40818 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
USP8P40818 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
USP8P40818 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms