Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6BP35913 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6BP35913 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6BP35913 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6BP35913 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PDE6BP35913 KRT8P39-201ENST00000396270 1433 ntBASIC20.42■□□□□ 0.86
PDE6BP35913 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
PDE6BP35913 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6BP35913 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PDE6BP35913 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PDE6BP35913 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.41■□□□□ 0.86
PDE6BP35913 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PDE6BP35913 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 SPDYE17-201ENST00000412399 783 ntBASIC20.41■□□□□ 0.86
PDE6BP35913 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.41■□□□□ 0.86
PDE6BP35913 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.41■□□□□ 0.86
PDE6BP35913 AC004461.2-201ENST00000629517 803 ntBASIC20.41■□□□□ 0.86
PDE6BP35913 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.41■□□□□ 0.86
PDE6BP35913 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC20.41■□□□□ 0.86
PDE6BP35913 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
PDE6BP35913 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PDE6BP35913 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC20.41■□□□□ 0.86
PDE6BP35913 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 AL138688.1-201ENST00000624851 1594 ntBASIC20.41■□□□□ 0.86
PDE6BP35913 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC20.41■□□□□ 0.86
PDE6BP35913 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC20.41■□□□□ 0.86
PDE6BP35913 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.41■□□□□ 0.86
PDE6BP35913 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.41■□□□□ 0.86
PDE6BP35913 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC20.41■□□□□ 0.86
PDE6BP35913 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PDE6BP35913 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.41■□□□□ 0.86
PDE6BP35913 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PDE6BP35913 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6BP35913 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6BP35913 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
PDE6BP35913 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6BP35913 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6BP35913 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6BP35913 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6BP35913 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PDE6BP35913 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6BP35913 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC20.4■□□□□ 0.86
PDE6BP35913 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PDE6BP35913 RPL28-204ENST00000431533 590 ntTSL 2 BASIC20.4■□□□□ 0.86
PDE6BP35913 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6BP35913 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6BP35913 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC20.4■□□□□ 0.86
PDE6BP35913 ELK1P1-201ENST00000485699 580 ntBASIC20.4■□□□□ 0.86
PDE6BP35913 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6BP35913 AC092658.1-201ENST00000505836 891 ntBASIC20.4■□□□□ 0.86
PDE6BP35913 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
PDE6BP35913 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC20.4■□□□□ 0.86
PDE6BP35913 AC124947.2-201ENST00000547118 1133 ntBASIC20.4■□□□□ 0.86
PDE6BP35913 AC123567.1-201ENST00000548294 1261 ntBASIC20.4■□□□□ 0.86
PDE6BP35913 AC023310.3-201ENST00000557027 670 ntBASIC20.4■□□□□ 0.86
PDE6BP35913 RPL28-206ENST00000558752 671 ntTSL 3 BASIC20.4■□□□□ 0.86
PDE6BP35913 AC100756.1-201ENST00000562736 682 ntBASIC20.4■□□□□ 0.86
PDE6BP35913 AC138749.3-201ENST00000567691 622 ntBASIC20.4■□□□□ 0.86
PDE6BP35913 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC20.4■□□□□ 0.86
PDE6BP35913 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC20.4■□□□□ 0.86
PDE6BP35913 CTBP2P3-201ENST00000585629 1255 ntBASIC20.4■□□□□ 0.86
PDE6BP35913 AC116165.1-201ENST00000611806 668 ntBASIC20.4■□□□□ 0.86
PDE6BP35913 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6BP35913 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC20.4■□□□□ 0.86
PDE6BP35913 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6BP35913 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PDE6BP35913 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.39■□□□□ 0.86
PDE6BP35913 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDE6BP35913 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PDE6BP35913 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDE6BP35913 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC20.39■□□□□ 0.86
PDE6BP35913 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
PDE6BP35913 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
PDE6BP35913 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC20.39■□□□□ 0.86
PDE6BP35913 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6BP35913 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.39■□□□□ 0.85
PDE6BP35913 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC20.39■□□□□ 0.85
PDE6BP35913 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6BP35913 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6BP35913 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PDE6BP35913 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
PDE6BP35913 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC20.39■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms