Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
KRT20P35900 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
KRT20P35900 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16■□□□□ 0.15
KRT20P35900 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16■□□□□ 0.15
KRT20P35900 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16■□□□□ 0.15
KRT20P35900 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT20P35900 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC15.99■□□□□ 0.15
KRT20P35900 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC15.99■□□□□ 0.15
KRT20P35900 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT20P35900 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
KRT20P35900 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT20P35900 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT20P35900 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC15.99■□□□□ 0.15
KRT20P35900 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 AF186996.4-201ENST00000467186 377 ntBASIC15.99■□□□□ 0.15
KRT20P35900 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.99■□□□□ 0.15
KRT20P35900 SART3-203ENST00000546611 1184 ntBASIC15.99■□□□□ 0.15
KRT20P35900 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT20P35900 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT20P35900 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 MTDHP4-201ENST00000600287 670 ntBASIC15.99■□□□□ 0.15
KRT20P35900 AC064862.7-201ENST00000604520 867 ntBASIC15.99■□□□□ 0.15
KRT20P35900 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT20P35900 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.99■□□□□ 0.15
KRT20P35900 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
KRT20P35900 NCF1C-201ENST00000438382 1427 ntBASIC15.99■□□□□ 0.15
KRT20P35900 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
KRT20P35900 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
KRT20P35900 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT20P35900 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC15.99■□□□□ 0.15
KRT20P35900 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC15.99■□□□□ 0.15
KRT20P35900 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
KRT20P35900 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
KRT20P35900 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
KRT20P35900 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
KRT20P35900 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
KRT20P35900 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
KRT20P35900 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
KRT20P35900 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
KRT20P35900 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
KRT20P35900 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.98■□□□□ 0.15
KRT20P35900 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.98■□□□□ 0.15
KRT20P35900 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC15.98■□□□□ 0.15
KRT20P35900 ACTG1P4-201ENST00000425123 1122 ntBASIC15.98■□□□□ 0.15
KRT20P35900 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.98■□□□□ 0.15
KRT20P35900 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC15.98■□□□□ 0.15
KRT20P35900 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC15.98■□□□□ 0.15
KRT20P35900 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC15.98■□□□□ 0.15
KRT20P35900 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC15.98■□□□□ 0.15
KRT20P35900 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.98■□□□□ 0.15
KRT20P35900 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC15.98■□□□□ 0.15
KRT20P35900 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC15.98■□□□□ 0.15
KRT20P35900 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.98■□□□□ 0.15
KRT20P35900 AC004817.3-201ENST00000602957 2129 ntBASIC15.98■□□□□ 0.15
KRT20P35900 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
KRT20P35900 GID4-202ENST00000376345 1391 ntTSL 3 BASIC15.98■□□□□ 0.15
KRT20P35900 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC15.98■□□□□ 0.15
KRT20P35900 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
KRT20P35900 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
KRT20P35900 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
KRT20P35900 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.97■□□□□ 0.15
KRT20P35900 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 LINC02012-201ENST00000608206 1725 ntBASIC15.97■□□□□ 0.15
KRT20P35900 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
KRT20P35900 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
KRT20P35900 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms