Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COPB2P35606 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC19.06■□□□□ 0.64
COPB2P35606 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC19.06■□□□□ 0.64
COPB2P35606 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
COPB2P35606 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC19.06■□□□□ 0.64
COPB2P35606 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC19.06■□□□□ 0.64
COPB2P35606 COQ6-210ENST00000554920 649 ntTSL 3 BASIC19.06■□□□□ 0.64
COPB2P35606 AF228730.6-201ENST00000641497 218 ntBASIC19.06■□□□□ 0.64
COPB2P35606 AC084121.3-201ENST00000641716 218 ntBASIC19.06■□□□□ 0.64
COPB2P35606 AC105233.6-201ENST00000642093 218 ntBASIC19.06■□□□□ 0.64
COPB2P35606 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPB2P35606 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC19.06■□□□□ 0.64
COPB2P35606 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.06■□□□□ 0.64
COPB2P35606 AC099398.1-201ENST00000567919 2776 ntBASIC19.06■□□□□ 0.64
COPB2P35606 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.06■□□□□ 0.64
COPB2P35606 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COPB2P35606 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC19.06■□□□□ 0.64
COPB2P35606 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPB2P35606 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COPB2P35606 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC19.06■□□□□ 0.64
COPB2P35606 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
COPB2P35606 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPB2P35606 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
COPB2P35606 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COPB2P35606 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC19.05■□□□□ 0.64
COPB2P35606 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.05■□□□□ 0.64
COPB2P35606 PCDHA12-202ENST00000613593 2588 ntBASIC19.05■□□□□ 0.64
COPB2P35606 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
COPB2P35606 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
COPB2P35606 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC19.05■□□□□ 0.64
COPB2P35606 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 COPE-202ENST00000349893 948 ntTSL 2 BASIC19.05■□□□□ 0.64
COPB2P35606 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
COPB2P35606 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC19.05■□□□□ 0.64
COPB2P35606 LY6E-204ENST00000519546 971 ntTSL 2 BASIC19.05■□□□□ 0.64
COPB2P35606 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.05■□□□□ 0.64
COPB2P35606 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC19.05■□□□□ 0.64
COPB2P35606 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.05■□□□□ 0.64
COPB2P35606 LINC02560-201ENST00000596379 459 ntBASIC19.05■□□□□ 0.64
COPB2P35606 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.05■□□□□ 0.64
COPB2P35606 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
COPB2P35606 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC19.05■□□□□ 0.64
COPB2P35606 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC19.05■□□□□ 0.64
COPB2P35606 AL035456.1-201ENST00000456064 1369 ntBASIC19.05■□□□□ 0.64
COPB2P35606 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
COPB2P35606 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
COPB2P35606 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPB2P35606 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPB2P35606 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
COPB2P35606 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPB2P35606 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPB2P35606 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPB2P35606 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.04■□□□□ 0.64
COPB2P35606 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.04■□□□□ 0.64
COPB2P35606 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC19.04■□□□□ 0.64
COPB2P35606 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPB2P35606 UGT1A2P-201ENST00000454886 866 ntBASIC19.04■□□□□ 0.64
COPB2P35606 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.04■□□□□ 0.64
COPB2P35606 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPB2P35606 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COPB2P35606 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC19.04■□□□□ 0.64
COPB2P35606 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC19.04■□□□□ 0.64
COPB2P35606 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.04■□□□□ 0.64
COPB2P35606 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.04■□□□□ 0.64
COPB2P35606 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPB2P35606 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.04■□□□□ 0.64
COPB2P35606 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.04■□□□□ 0.64
COPB2P35606 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPB2P35606 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COPB2P35606 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPB2P35606 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
COPB2P35606 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.04■□□□□ 0.64
COPB2P35606 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
COPB2P35606 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
COPB2P35606 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC19.03■□□□□ 0.64
COPB2P35606 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC19.03■□□□□ 0.64
COPB2P35606 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
COPB2P35606 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
COPB2P35606 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.03■□□□□ 0.64
COPB2P35606 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
COPB2P35606 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms