Protein–RNA interactions for Protein: P32239

CCKBR, Gastrin/cholecystokinin type B receptor, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCKBRP32239 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCKBRP32239 ALG1L8P-201ENST00000533887 760 ntBASIC16.07■□□□□ 0.16
CCKBRP32239 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.07■□□□□ 0.16
CCKBRP32239 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.07■□□□□ 0.16
CCKBRP32239 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CCKBRP32239 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCKBRP32239 AC027307.2-201ENST00000591252 911 ntBASIC16.07■□□□□ 0.16
CCKBRP32239 MIR6080-201ENST00000617359 66 ntBASIC16.07■□□□□ 0.16
CCKBRP32239 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCKBRP32239 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CCKBRP32239 FO538757.1-201ENST00000623083 1397 ntBASIC16.07■□□□□ 0.16
CCKBRP32239 AC016396.2-201ENST00000562575 1417 ntBASIC16.07■□□□□ 0.16
CCKBRP32239 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCKBRP32239 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCKBRP32239 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCKBRP32239 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.07■□□□□ 0.16
CCKBRP32239 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCKBRP32239 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.07■□□□□ 0.16
CCKBRP32239 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCKBRP32239 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CCKBRP32239 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CCKBRP32239 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC16.06■□□□□ 0.16
CCKBRP32239 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.06■□□□□ 0.16
CCKBRP32239 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.06■□□□□ 0.16
CCKBRP32239 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.06■□□□□ 0.16
CCKBRP32239 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.06■□□□□ 0.16
CCKBRP32239 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCKBRP32239 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.06■□□□□ 0.16
CCKBRP32239 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.06■□□□□ 0.16
CCKBRP32239 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.06■□□□□ 0.16
CCKBRP32239 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.06■□□□□ 0.16
CCKBRP32239 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC16.06■□□□□ 0.16
CCKBRP32239 TREML5P-201ENST00000421694 576 ntBASIC16.06■□□□□ 0.16
CCKBRP32239 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.06■□□□□ 0.16
CCKBRP32239 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.06■□□□□ 0.16
CCKBRP32239 AC002472.2-201ENST00000442739 958 ntBASIC16.06■□□□□ 0.16
CCKBRP32239 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCKBRP32239 TSPY16P-201ENST00000449843 468 ntBASIC16.06■□□□□ 0.16
CCKBRP32239 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.06■□□□□ 0.16
CCKBRP32239 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.06■□□□□ 0.16
CCKBRP32239 AC069120.2-201ENST00000524091 540 ntBASIC16.06■□□□□ 0.16
CCKBRP32239 POLD4-211ENST00000539074 714 ntTSL 3 BASIC16.06■□□□□ 0.16
CCKBRP32239 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.06■□□□□ 0.16
CCKBRP32239 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC16.06■□□□□ 0.16
CCKBRP32239 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC16.06■□□□□ 0.16
CCKBRP32239 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCKBRP32239 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC16.06■□□□□ 0.16
CCKBRP32239 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.06■□□□□ 0.16
CCKBRP32239 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCKBRP32239 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC16.06■□□□□ 0.16
CCKBRP32239 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCKBRP32239 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CCKBRP32239 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCKBRP32239 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.05■□□□□ 0.16
CCKBRP32239 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCKBRP32239 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCKBRP32239 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCKBRP32239 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CCKBRP32239 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.05■□□□□ 0.16
CCKBRP32239 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCKBRP32239 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CCKBRP32239 AC236430.1-201ENST00000402231 743 ntBASIC16.05■□□□□ 0.16
CCKBRP32239 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CCKBRP32239 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.05■□□□□ 0.16
CCKBRP32239 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCKBRP32239 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.05■□□□□ 0.16
CCKBRP32239 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.05■□□□□ 0.16
CCKBRP32239 IGHV3-42-201ENST00000520410 361 ntBASIC16.05■□□□□ 0.16
CCKBRP32239 RN7SL204P-201ENST00000582831 262 ntBASIC16.05■□□□□ 0.16
CCKBRP32239 YTHDF3-AS1-201ENST00000603538 718 ntBASIC16.05■□□□□ 0.16
CCKBRP32239 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC16.05■□□□□ 0.16
CCKBRP32239 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCKBRP32239 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC16.05■□□□□ 0.16
CCKBRP32239 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.05■□□□□ 0.16
CCKBRP32239 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.05■□□□□ 0.16
CCKBRP32239 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCKBRP32239 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CCKBRP32239 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCKBRP32239 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms