Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PTPN6P29350 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PTPN6P29350 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN6P29350 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN6P29350 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN6P29350 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN6P29350 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN6P29350 RAB17-203ENST00000409576 466 ntTSL 3 BASIC15.91■□□□□ 0.14
PTPN6P29350 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.91■□□□□ 0.14
PTPN6P29350 HNRNPDP1-201ENST00000439535 754 ntBASIC15.91■□□□□ 0.14
PTPN6P29350 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN6P29350 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN6P29350 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.91■□□□□ 0.14
PTPN6P29350 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN6P29350 AP001005.1-201ENST00000571755 1248 ntBASIC15.91■□□□□ 0.14
PTPN6P29350 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN6P29350 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN6P29350 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN6P29350 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN6P29350 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PTPN6P29350 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 GGT3P-204ENST00000453783 1664 ntBASIC15.91■□□□□ 0.14
PTPN6P29350 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC15.91■□□□□ 0.14
PTPN6P29350 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.91■□□□□ 0.14
PTPN6P29350 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 NFIC-211ENST00000641145 8399 ntBASIC15.91■□□□□ 0.14
PTPN6P29350 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PTPN6P29350 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
PTPN6P29350 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN6P29350 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
PTPN6P29350 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN6P29350 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN6P29350 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
PTPN6P29350 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC15.9■□□□□ 0.14
PTPN6P29350 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.9■□□□□ 0.14
PTPN6P29350 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PTPN6P29350 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.9■□□□□ 0.14
PTPN6P29350 RPS2P1-201ENST00000434010 821 ntBASIC15.9■□□□□ 0.14
PTPN6P29350 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN6P29350 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN6P29350 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN6P29350 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN6P29350 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.9■□□□□ 0.14
PTPN6P29350 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC15.9■□□□□ 0.14
PTPN6P29350 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC15.9■□□□□ 0.14
PTPN6P29350 AC008894.3-201ENST00000624324 3103 ntBASIC15.9■□□□□ 0.14
PTPN6P29350 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
PTPN6P29350 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PTPN6P29350 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
PTPN6P29350 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PTPN6P29350 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
PTPN6P29350 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.14
PTPN6P29350 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN6P29350 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 TOP3BP1-201ENST00000420768 1380 ntBASIC15.89■□□□□ 0.13
PTPN6P29350 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
PTPN6P29350 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
PTPN6P29350 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC15.89■□□□□ 0.13
PTPN6P29350 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
PTPN6P29350 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.89■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms