Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
GDF1P27539 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.17■□□□□ 0.02
GDF1P27539 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.17■□□□□ 0.02
GDF1P27539 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
GDF1P27539 AKAP8P1-201ENST00000434743 1349 ntBASIC15.17■□□□□ 0.02
GDF1P27539 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.16■□□□□ 0.02
GDF1P27539 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.16■□□□□ 0.02
GDF1P27539 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC15.16■□□□□ 0.02
GDF1P27539 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.16■□□□□ 0.02
GDF1P27539 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC15.16■□□□□ 0.02
GDF1P27539 GGCT-205ENST00000409436 954 ntTSL 3 BASIC15.16■□□□□ 0.02
GDF1P27539 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.16■□□□□ 0.02
GDF1P27539 AC092474.2-201ENST00000424288 719 ntBASIC15.16■□□□□ 0.02
GDF1P27539 AC005237.2-201ENST00000434368 219 ntBASIC15.16■□□□□ 0.02
GDF1P27539 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
GDF1P27539 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC15.16■□□□□ 0.02
GDF1P27539 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC15.16■□□□□ 0.02
GDF1P27539 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC15.16■□□□□ 0.02
GDF1P27539 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.16■□□□□ 0.02
GDF1P27539 AC021097.1-201ENST00000607902 574 ntBASIC15.16■□□□□ 0.02
GDF1P27539 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC15.16■□□□□ 0.02
GDF1P27539 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 AC006277.1-201ENST00000624348 1610 ntBASIC15.16■□□□□ 0.02
GDF1P27539 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 WASH6P-202ENST00000359512 1437 ntBASIC15.16■□□□□ 0.02
GDF1P27539 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.16■□□□□ 0.02
GDF1P27539 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
GDF1P27539 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
GDF1P27539 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.15■□□□□ 0.02
GDF1P27539 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.15■□□□□ 0.02
GDF1P27539 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
GDF1P27539 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.15■□□□□ 0.02
GDF1P27539 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
GDF1P27539 AL592309.1-201ENST00000443127 649 ntBASIC15.15■□□□□ 0.02
GDF1P27539 AC079140.1-201ENST00000508039 487 ntBASIC15.15■□□□□ 0.02
GDF1P27539 IGHV3-62-201ENST00000520057 340 ntBASIC15.15■□□□□ 0.02
GDF1P27539 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC15.15■□□□□ 0.02
GDF1P27539 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.15■□□□□ 0.02
GDF1P27539 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
GDF1P27539 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC15.15■□□□□ 0.02
GDF1P27539 AC027612.4-201ENST00000605371 583 ntBASIC15.15■□□□□ 0.02
GDF1P27539 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC15.15■□□□□ 0.02
GDF1P27539 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC15.15■□□□□ 0.02
GDF1P27539 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.15■□□□□ 0.02
GDF1P27539 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
GDF1P27539 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
GDF1P27539 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC15.15■□□□□ 0.02
GDF1P27539 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
GDF1P27539 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.15■□□□□ 0.02
GDF1P27539 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.15■□□□□ 0.02
GDF1P27539 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
GDF1P27539 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms