Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARSP26640 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARSP26640 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
VARSP26640 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.53■□□□□ 0.24
VARSP26640 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARSP26640 AL603756.1-201ENST00000606511 2163 ntBASIC16.53■□□□□ 0.24
VARSP26640 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.53■□□□□ 0.24
VARSP26640 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.53■□□□□ 0.24
VARSP26640 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARSP26640 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARSP26640 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARSP26640 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
VARSP26640 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
VARSP26640 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.53■□□□□ 0.24
VARSP26640 SLC25A1P1-201ENST00000528351 927 ntBASIC16.53■□□□□ 0.24
VARSP26640 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC16.53■□□□□ 0.24
VARSP26640 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.53■□□□□ 0.24
VARSP26640 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC16.53■□□□□ 0.24
VARSP26640 Z99916.3-201ENST00000623422 1080 ntBASIC16.53■□□□□ 0.24
VARSP26640 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC16.53■□□□□ 0.24
VARSP26640 AC079781.4-201ENST00000641908 219 ntBASIC16.53■□□□□ 0.24
VARSP26640 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARSP26640 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VARSP26640 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARSP26640 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARSP26640 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.53■□□□□ 0.24
VARSP26640 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
VARSP26640 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
VARSP26640 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARSP26640 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VARSP26640 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
VARSP26640 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
VARSP26640 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VARSP26640 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VARSP26640 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
VARSP26640 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.52■□□□□ 0.24
VARSP26640 AL590787.1-201ENST00000568856 1315 ntBASIC16.52■□□□□ 0.24
VARSP26640 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VARSP26640 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
VARSP26640 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VARSP26640 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.52■□□□□ 0.24
VARSP26640 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VARSP26640 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
VARSP26640 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
VARSP26640 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.52■□□□□ 0.24
VARSP26640 AL591424.1-201ENST00000442569 1213 ntBASIC16.52■□□□□ 0.24
VARSP26640 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.52■□□□□ 0.24
VARSP26640 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.52■□□□□ 0.24
VARSP26640 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.52■□□□□ 0.24
VARSP26640 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.52■□□□□ 0.24
VARSP26640 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.52■□□□□ 0.24
VARSP26640 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.52■□□□□ 0.24
VARSP26640 AL589182.2-201ENST00000619332 1049 ntBASIC16.52■□□□□ 0.24
VARSP26640 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.52■□□□□ 0.24
VARSP26640 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.52■□□□□ 0.23
VARSP26640 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.52■□□□□ 0.23
VARSP26640 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC16.52■□□□□ 0.23
VARSP26640 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.52■□□□□ 0.23
VARSP26640 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.52■□□□□ 0.23
VARSP26640 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.23
VARSP26640 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
VARSP26640 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
VARSP26640 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.51■□□□□ 0.23
VARSP26640 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.51■□□□□ 0.23
VARSP26640 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.51■□□□□ 0.23
VARSP26640 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC16.51■□□□□ 0.23
VARSP26640 HNRNPRP1-201ENST00000453465 1695 ntBASIC16.51■□□□□ 0.23
VARSP26640 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 RAB17-203ENST00000409576 466 ntTSL 3 BASIC16.51■□□□□ 0.23
VARSP26640 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.51■□□□□ 0.23
VARSP26640 POLD2P1-201ENST00000511220 997 ntBASIC16.51■□□□□ 0.23
VARSP26640 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
VARSP26640 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.51■□□□□ 0.23
VARSP26640 AL139424.1-201ENST00000607572 797 ntBASIC16.51■□□□□ 0.23
VARSP26640 FER1L4-210ENST00000615531 5998 ntBASIC16.51■□□□□ 0.23
VARSP26640 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
VARSP26640 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VARSP26640 CROCCP1-201ENST00000426910 5675 ntBASIC16.5■□□□□ 0.23
VARSP26640 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VARSP26640 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
VARSP26640 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.5■□□□□ 0.23
VARSP26640 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
VARSP26640 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VARSP26640 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
VARSP26640 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms