Protein–RNA interactions for Protein: P22415

USF1, Upstream stimulatory factor 1, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USF1P22415 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.21□□□□□ -0.13
USF1P22415 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
USF1P22415 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC14.21□□□□□ -0.13
USF1P22415 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.21□□□□□ -0.13
USF1P22415 AL355306.1-201ENST00000415580 579 ntBASIC14.21□□□□□ -0.13
USF1P22415 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 AC140658.5-201ENST00000438532 169 ntBASIC14.21□□□□□ -0.13
USF1P22415 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC14.21□□□□□ -0.13
USF1P22415 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.21□□□□□ -0.13
USF1P22415 AC109322.1-201ENST00000524499 1264 ntBASIC14.21□□□□□ -0.13
USF1P22415 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
USF1P22415 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC14.21□□□□□ -0.13
USF1P22415 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
USF1P22415 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC14.21□□□□□ -0.13
USF1P22415 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC14.21□□□□□ -0.13
USF1P22415 FLJ16779-201ENST00000612722 7638 ntBASIC14.21□□□□□ -0.13
USF1P22415 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.21□□□□□ -0.13
USF1P22415 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC14.21□□□□□ -0.13
USF1P22415 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
USF1P22415 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
USF1P22415 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.14
USF1P22415 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
USF1P22415 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
USF1P22415 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.21□□□□□ -0.14
USF1P22415 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
USF1P22415 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
USF1P22415 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
USF1P22415 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
USF1P22415 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
USF1P22415 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
USF1P22415 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
USF1P22415 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC14.2□□□□□ -0.14
USF1P22415 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
USF1P22415 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.2□□□□□ -0.14
USF1P22415 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.2□□□□□ -0.14
USF1P22415 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
USF1P22415 AL627223.1-201ENST00000416693 442 ntBASIC14.2□□□□□ -0.14
USF1P22415 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC14.2□□□□□ -0.14
USF1P22415 RN7SL589P-201ENST00000481268 310 ntBASIC14.2□□□□□ -0.14
USF1P22415 AC067863.1-201ENST00000494933 530 ntBASIC14.2□□□□□ -0.14
USF1P22415 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.2□□□□□ -0.14
USF1P22415 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
USF1P22415 RPL28-205ENST00000558131 444 ntTSL 5 BASIC14.2□□□□□ -0.14
USF1P22415 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC14.2□□□□□ -0.14
USF1P22415 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.2□□□□□ -0.14
USF1P22415 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
USF1P22415 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC14.2□□□□□ -0.14
USF1P22415 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
USF1P22415 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC14.2□□□□□ -0.14
USF1P22415 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.2□□□□□ -0.14
USF1P22415 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
USF1P22415 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.2□□□□□ -0.14
USF1P22415 CROCCP2-202ENST00000412962 2773 ntBASIC14.2□□□□□ -0.14
USF1P22415 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.2□□□□□ -0.14
USF1P22415 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
USF1P22415 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
USF1P22415 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
USF1P22415 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC14.19□□□□□ -0.14
USF1P22415 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
USF1P22415 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC14.19□□□□□ -0.14
USF1P22415 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
USF1P22415 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
USF1P22415 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
USF1P22415 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
USF1P22415 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms