Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KCNA3P22001 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
KCNA3P22001 GOLGA2P4-201ENST00000441462 777 ntBASIC20.23■□□□□ 0.83
KCNA3P22001 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC20.23■□□□□ 0.83
KCNA3P22001 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC20.23■□□□□ 0.83
KCNA3P22001 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
KCNA3P22001 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC20.23■□□□□ 0.83
KCNA3P22001 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC20.23■□□□□ 0.83
KCNA3P22001 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
KCNA3P22001 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
KCNA3P22001 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
KCNA3P22001 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC20.23■□□□□ 0.83
KCNA3P22001 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.23■□□□□ 0.83
KCNA3P22001 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
KCNA3P22001 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
KCNA3P22001 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.23■□□□□ 0.83
KCNA3P22001 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNA3P22001 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC20.22■□□□□ 0.83
KCNA3P22001 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNA3P22001 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC20.22■□□□□ 0.83
KCNA3P22001 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC20.22■□□□□ 0.83
KCNA3P22001 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
KCNA3P22001 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.22■□□□□ 0.83
KCNA3P22001 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
KCNA3P22001 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 AC099548.2-209ENST00000480264 625 ntBASIC20.22■□□□□ 0.83
KCNA3P22001 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNA3P22001 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC20.22■□□□□ 0.83
KCNA3P22001 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC20.22■□□□□ 0.83
KCNA3P22001 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC20.22■□□□□ 0.83
KCNA3P22001 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
KCNA3P22001 RETN-203ENST00000629642 400 ntTSL 5 BASIC20.22■□□□□ 0.83
KCNA3P22001 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC20.22■□□□□ 0.83
KCNA3P22001 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
KCNA3P22001 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC20.22■□□□□ 0.83
KCNA3P22001 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
KCNA3P22001 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
KCNA3P22001 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC20.22■□□□□ 0.83
KCNA3P22001 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNA3P22001 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
KCNA3P22001 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNA3P22001 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
KCNA3P22001 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNA3P22001 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNA3P22001 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNA3P22001 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNA3P22001 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KCNA3P22001 BRWD1P1-201ENST00000401091 371 ntBASIC20.21■□□□□ 0.83
KCNA3P22001 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC20.21■□□□□ 0.83
KCNA3P22001 AC093724.1-201ENST00000448659 1027 ntBASIC20.21■□□□□ 0.83
KCNA3P22001 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC20.21■□□□□ 0.83
KCNA3P22001 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC20.21■□□□□ 0.83
KCNA3P22001 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC20.21■□□□□ 0.83
KCNA3P22001 MIR3615-201ENST00000581999 87 ntBASIC20.21■□□□□ 0.83
KCNA3P22001 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNA3P22001 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNA3P22001 ABBA01031660.1-201ENST00000635219 756 ntBASIC20.21■□□□□ 0.83
KCNA3P22001 AC116353.5-201ENST00000638148 1699 ntBASIC20.21■□□□□ 0.83
KCNA3P22001 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNA3P22001 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.21■□□□□ 0.83
KCNA3P22001 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNA3P22001 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.21■□□□□ 0.83
KCNA3P22001 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KCNA3P22001 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
KCNA3P22001 AL589702.1-201ENST00000641229 1509 ntBASIC20.21■□□□□ 0.83
KCNA3P22001 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms