Protein–RNA interactions for Protein: P19387

POLR2C, DNA-directed RNA polymerase II subunit RPB3, humanhuman

Predicted RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2CP19387 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
POLR2CP19387 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.22■□□□□ 0.19
POLR2CP19387 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.22■□□□□ 0.19
POLR2CP19387 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC16.22■□□□□ 0.19
POLR2CP19387 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.22■□□□□ 0.19
POLR2CP19387 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.22■□□□□ 0.19
POLR2CP19387 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.22■□□□□ 0.19
POLR2CP19387 ACTG1P14-201ENST00000446382 1122 ntBASIC16.22■□□□□ 0.19
POLR2CP19387 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
POLR2CP19387 PUS1-205ENST00000535067 838 ntTSL 3 BASIC16.22■□□□□ 0.19
POLR2CP19387 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.22■□□□□ 0.19
POLR2CP19387 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.22■□□□□ 0.19
POLR2CP19387 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.22■□□□□ 0.19
POLR2CP19387 AP001160.2-201ENST00000596071 487 ntBASIC16.22■□□□□ 0.19
POLR2CP19387 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
POLR2CP19387 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
POLR2CP19387 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC16.22■□□□□ 0.19
POLR2CP19387 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
POLR2CP19387 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
POLR2CP19387 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2CP19387 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2CP19387 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
POLR2CP19387 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2CP19387 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.21■□□□□ 0.19
POLR2CP19387 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
POLR2CP19387 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.21■□□□□ 0.19
POLR2CP19387 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
POLR2CP19387 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2CP19387 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.21■□□□□ 0.19
POLR2CP19387 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2CP19387 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2CP19387 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2CP19387 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
POLR2CP19387 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
POLR2CP19387 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2CP19387 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.21■□□□□ 0.19
POLR2CP19387 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.21■□□□□ 0.19
POLR2CP19387 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.21■□□□□ 0.19
POLR2CP19387 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
POLR2CP19387 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.21■□□□□ 0.19
POLR2CP19387 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC16.21■□□□□ 0.19
POLR2CP19387 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.21■□□□□ 0.19
POLR2CP19387 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.21■□□□□ 0.19
POLR2CP19387 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC16.21■□□□□ 0.19
POLR2CP19387 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.21■□□□□ 0.19
POLR2CP19387 SNHG9-202ENST00000564014 471 ntBASIC16.21■□□□□ 0.19
POLR2CP19387 MIR4492-201ENST00000581627 80 ntBASIC16.21■□□□□ 0.19
POLR2CP19387 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.21■□□□□ 0.19
POLR2CP19387 CYP2A7P1-201ENST00000595391 815 ntBASIC16.21■□□□□ 0.19
POLR2CP19387 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2CP19387 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
POLR2CP19387 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
POLR2CP19387 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.21■□□□□ 0.18
POLR2CP19387 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
POLR2CP19387 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
POLR2CP19387 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2CP19387 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2CP19387 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2CP19387 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2CP19387 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2CP19387 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.2■□□□□ 0.18
POLR2CP19387 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2CP19387 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2CP19387 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2CP19387 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
POLR2CP19387 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2CP19387 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.2■□□□□ 0.18
POLR2CP19387 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2CP19387 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC16.2■□□□□ 0.18
POLR2CP19387 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.2■□□□□ 0.18
POLR2CP19387 AP006288.1-201ENST00000446065 395 ntBASIC16.2■□□□□ 0.18
POLR2CP19387 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.2■□□□□ 0.18
POLR2CP19387 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
POLR2CP19387 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.2■□□□□ 0.18
POLR2CP19387 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2CP19387 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.2■□□□□ 0.18
POLR2CP19387 AL009183.1-201ENST00000603760 355 ntBASIC16.2■□□□□ 0.18
POLR2CP19387 AL031055.1-201ENST00000606362 631 ntBASIC16.2■□□□□ 0.18
POLR2CP19387 AC099522.2-201ENST00000607001 744 ntBASIC16.2■□□□□ 0.18
POLR2CP19387 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
POLR2CP19387 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2CP19387 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
POLR2CP19387 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
POLR2CP19387 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
POLR2CP19387 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms