Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC17.7■□□□□ 0.42
PTPN1P18031 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
PTPN1P18031 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN1P18031 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PTPN1P18031 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 RNF216P1-203ENST00000404404 2427 ntBASIC17.69■□□□□ 0.42
PTPN1P18031 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN1P18031 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PTPN1P18031 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PTPN1P18031 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
PTPN1P18031 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 AC004461.1-201ENST00000412461 403 ntBASIC17.69■□□□□ 0.42
PTPN1P18031 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 AP000344.2-201ENST00000512987 629 ntBASIC17.69■□□□□ 0.42
PTPN1P18031 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 AC022145.2-201ENST00000598203 171 ntBASIC17.69■□□□□ 0.42
PTPN1P18031 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 AC124067.4-201ENST00000519691 2379 ntBASIC17.69■□□□□ 0.42
PTPN1P18031 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.69■□□□□ 0.42
PTPN1P18031 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
PTPN1P18031 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
PTPN1P18031 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PTPN1P18031 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN1P18031 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN1P18031 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN1P18031 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 AC016027.1-202ENST00000607927 1699 ntBASIC17.68■□□□□ 0.42
PTPN1P18031 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN1P18031 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
PTPN1P18031 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTPN1P18031 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PTPN1P18031 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.68■□□□□ 0.42
PTPN1P18031 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN1P18031 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.68■□□□□ 0.42
PTPN1P18031 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTPN1P18031 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.68■□□□□ 0.42
PTPN1P18031 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTPN1P18031 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC17.68■□□□□ 0.42
PTPN1P18031 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
PTPN1P18031 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.68■□□□□ 0.42
PTPN1P18031 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN1P18031 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN1P18031 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN1P18031 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PTPN1P18031 AL512652.2-201ENST00000625156 1716 ntBASIC17.68■□□□□ 0.42
PTPN1P18031 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC17.68■□□□□ 0.42
PTPN1P18031 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
PTPN1P18031 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PTPN1P18031 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC17.68■□□□□ 0.42
PTPN1P18031 AC078925.2-201ENST00000624013 1973 ntBASIC17.68■□□□□ 0.42
PTPN1P18031 AC084018.2-201ENST00000613093 2607 ntBASIC17.68■□□□□ 0.42
PTPN1P18031 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
PTPN1P18031 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PTPN1P18031 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN1P18031 AMT-206ENST00000458307 1860 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN1P18031 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
PTPN1P18031 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.67■□□□□ 0.42
PTPN1P18031 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
PTPN1P18031 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
PTPN1P18031 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC17.67■□□□□ 0.42
PTPN1P18031 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.67■□□□□ 0.42
PTPN1P18031 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PTPN1P18031 RN7SL589P-201ENST00000481268 310 ntBASIC17.67■□□□□ 0.42
PTPN1P18031 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.67■□□□□ 0.42
PTPN1P18031 AC079140.1-201ENST00000508039 487 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms