Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.87■□□□□ 0.13
NCK1P16333 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
NCK1P16333 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
NCK1P16333 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.87■□□□□ 0.13
NCK1P16333 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.87■□□□□ 0.13
NCK1P16333 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.87■□□□□ 0.13
NCK1P16333 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.87■□□□□ 0.13
NCK1P16333 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.87■□□□□ 0.13
NCK1P16333 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
NCK1P16333 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
NCK1P16333 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.87■□□□□ 0.13
NCK1P16333 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC15.87■□□□□ 0.13
NCK1P16333 AC011467.2-201ENST00000598425 242 ntBASIC15.87■□□□□ 0.13
NCK1P16333 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
NCK1P16333 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC15.87■□□□□ 0.13
NCK1P16333 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC15.87■□□□□ 0.13
NCK1P16333 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
NCK1P16333 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.87■□□□□ 0.13
NCK1P16333 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.86■□□□□ 0.13
NCK1P16333 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.86■□□□□ 0.13
NCK1P16333 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.86■□□□□ 0.13
NCK1P16333 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.86■□□□□ 0.13
NCK1P16333 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.86■□□□□ 0.13
NCK1P16333 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC15.86■□□□□ 0.13
NCK1P16333 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.86■□□□□ 0.13
NCK1P16333 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC15.86■□□□□ 0.13
NCK1P16333 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 NDUFV2-AS1-203ENST00000608008 779 ntBASIC15.86■□□□□ 0.13
NCK1P16333 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.86■□□□□ 0.13
NCK1P16333 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.86■□□□□ 0.13
NCK1P16333 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC15.86■□□□□ 0.13
NCK1P16333 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NCK1P16333 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
NCK1P16333 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NCK1P16333 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.86■□□□□ 0.13
NCK1P16333 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.86■□□□□ 0.13
NCK1P16333 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.86■□□□□ 0.13
NCK1P16333 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
NCK1P16333 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
NCK1P16333 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.86■□□□□ 0.13
NCK1P16333 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.86■□□□□ 0.13
NCK1P16333 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.86■□□□□ 0.13
NCK1P16333 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.86■□□□□ 0.13
NCK1P16333 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.85■□□□□ 0.13
NCK1P16333 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
NCK1P16333 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.85■□□□□ 0.13
NCK1P16333 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
NCK1P16333 AL671710.1-201ENST00000610245 2349 ntBASIC15.85■□□□□ 0.13
NCK1P16333 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NCK1P16333 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC15.85■□□□□ 0.13
NCK1P16333 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.85■□□□□ 0.13
NCK1P16333 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
NCK1P16333 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.85■□□□□ 0.13
NCK1P16333 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
NCK1P16333 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC15.85■□□□□ 0.13
NCK1P16333 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
NCK1P16333 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
NCK1P16333 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
NCK1P16333 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.85■□□□□ 0.13
NCK1P16333 ACTG1P4-201ENST00000425123 1122 ntBASIC15.85■□□□□ 0.13
NCK1P16333 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms