Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 BCRP1-201ENST00000444246 691 ntBASIC13.09□□□□□ -0.31
CD28P10747 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.09□□□□□ -0.31
CD28P10747 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.09□□□□□ -0.31
CD28P10747 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.09□□□□□ -0.31
CD28P10747 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC13.09□□□□□ -0.31
CD28P10747 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.09□□□□□ -0.31
CD28P10747 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.09□□□□□ -0.31
CD28P10747 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
CD28P10747 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CD28P10747 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.09□□□□□ -0.31
CD28P10747 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.09□□□□□ -0.31
CD28P10747 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC13.09□□□□□ -0.31
CD28P10747 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CD28P10747 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CD28P10747 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CD28P10747 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
CD28P10747 TPR-209ENST00000613151 2478 ntTSL 5 BASIC13.08□□□□□ -0.31
CD28P10747 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CD28P10747 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.31
CD28P10747 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CD28P10747 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
CD28P10747 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CD28P10747 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.08□□□□□ -0.32
CD28P10747 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC13.08□□□□□ -0.32
CD28P10747 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
CD28P10747 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 AC012313.1-201ENST00000593393 3059 ntBASIC13.08□□□□□ -0.32
CD28P10747 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.08□□□□□ -0.32
CD28P10747 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 SLC25A1P3-201ENST00000395415 828 ntBASIC13.08□□□□□ -0.32
CD28P10747 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC13.08□□□□□ -0.32
CD28P10747 AC092474.2-201ENST00000424288 719 ntBASIC13.08□□□□□ -0.32
CD28P10747 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC13.08□□□□□ -0.32
CD28P10747 CNN2P2-201ENST00000443536 909 ntBASIC13.08□□□□□ -0.32
CD28P10747 CNN2P3-201ENST00000450201 906 ntBASIC13.08□□□□□ -0.32
CD28P10747 AC067863.1-201ENST00000494933 530 ntBASIC13.08□□□□□ -0.32
CD28P10747 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 MTRF1LP2-201ENST00000506027 1122 ntBASIC13.08□□□□□ -0.32
CD28P10747 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.08□□□□□ -0.32
CD28P10747 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
CD28P10747 AL031055.1-201ENST00000606362 631 ntBASIC13.08□□□□□ -0.32
CD28P10747 AL096865.1-201ENST00000606796 927 ntBASIC13.08□□□□□ -0.32
CD28P10747 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.08□□□□□ -0.32
CD28P10747 AL136317.3-201ENST00000618497 906 ntBASIC13.08□□□□□ -0.32
CD28P10747 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC13.08□□□□□ -0.32
CD28P10747 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.08□□□□□ -0.32
CD28P10747 GNE-204ENST00000539208 2190 ntTSL 2 BASIC13.08□□□□□ -0.32
CD28P10747 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CD28P10747 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CD28P10747 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC13.08□□□□□ -0.32
CD28P10747 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CD28P10747 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC13.07□□□□□ -0.32
CD28P10747 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.07□□□□□ -0.32
CD28P10747 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.07□□□□□ -0.32
CD28P10747 RNU1-129P-201ENST00000384064 167 ntBASIC13.07□□□□□ -0.32
CD28P10747 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 RPL30-202ENST00000396070 440 ntTSL 2 BASIC13.07□□□□□ -0.32
CD28P10747 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC13.07□□□□□ -0.32
CD28P10747 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.07□□□□□ -0.32
CD28P10747 AC109635.5-201ENST00000533593 962 ntBASIC13.07□□□□□ -0.32
CD28P10747 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.07□□□□□ -0.32
CD28P10747 AC087641.1-201ENST00000557561 1021 ntBASIC13.07□□□□□ -0.32
CD28P10747 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.07□□□□□ -0.32
CD28P10747 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CD28P10747 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC13.07□□□□□ -0.32
CD28P10747 AC091167.2-201ENST00000579581 588 ntBASIC13.07□□□□□ -0.32
CD28P10747 U1.21-201ENST00000580816 167 ntBASIC13.07□□□□□ -0.32
CD28P10747 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms