Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM17P0DL12 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
SMIM17P0DL12 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM17P0DL12 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM17P0DL12 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM17P0DL12 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM17P0DL12 AL353692.3-201ENST00000407031 1396 ntBASIC12.55□□□□□ -0.4
SMIM17P0DL12 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC12.55□□□□□ -0.4
SMIM17P0DL12 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC12.55□□□□□ -0.4
SMIM17P0DL12 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
SMIM17P0DL12 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 AP002490.2-201ENST00000524791 560 ntBASIC12.54□□□□□ -0.4
SMIM17P0DL12 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 LITAF-220ENST00000620789 692 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 AC024909.3-201ENST00000611513 2257 ntBASIC12.54□□□□□ -0.4
SMIM17P0DL12 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC12.54□□□□□ -0.4
SMIM17P0DL12 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
SMIM17P0DL12 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 AC092053.1-201ENST00000605787 1936 ntBASIC12.53□□□□□ -0.4
SMIM17P0DL12 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 IGHGP-201ENST00000390555 1178 ntBASIC12.53□□□□□ -0.4
SMIM17P0DL12 COX5BP2-201ENST00000392354 334 ntBASIC12.53□□□□□ -0.4
SMIM17P0DL12 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 DENND3-207ENST00000518347 850 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 GPR32P1-201ENST00000601788 811 ntBASIC12.53□□□□□ -0.4
SMIM17P0DL12 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
SMIM17P0DL12 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
SMIM17P0DL12 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms