Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 FAM185BP-201ENST00000443595 716 ntBASIC15.17■□□□□ 0.02
FREM3P0C091 AC069335.1-201ENST00000489972 472 ntBASIC15.17■□□□□ 0.02
FREM3P0C091 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 AC027796.2-201ENST00000575326 344 ntBASIC15.17■□□□□ 0.02
FREM3P0C091 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC15.17■□□□□ 0.02
FREM3P0C091 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
FREM3P0C091 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 TUBB8P12-201ENST00000308911 1335 ntBASIC15.17■□□□□ 0.02
FREM3P0C091 TUBB7P-202ENST00000428444 1305 ntBASIC15.17■□□□□ 0.02
FREM3P0C091 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 TUBB8P7-204ENST00000567960 1332 ntBASIC15.17■□□□□ 0.02
FREM3P0C091 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
FREM3P0C091 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
FREM3P0C091 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
FREM3P0C091 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.17■□□□□ 0.02
FREM3P0C091 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.17■□□□□ 0.02
FREM3P0C091 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
FREM3P0C091 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 BSG-214ENST00000614867 960 ntTSL 3 BASIC15.17■□□□□ 0.02
FREM3P0C091 AL645728.2-201ENST00000641974 660 ntBASIC15.17■□□□□ 0.02
FREM3P0C091 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC15.17■□□□□ 0.02
FREM3P0C091 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
FREM3P0C091 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.17■□□□□ 0.02
FREM3P0C091 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC15.17■□□□□ 0.02
FREM3P0C091 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
FREM3P0C091 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
FREM3P0C091 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
FREM3P0C091 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
FREM3P0C091 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
FREM3P0C091 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
FREM3P0C091 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.16■□□□□ 0.02
FREM3P0C091 GCK-202ENST00000345378 2421 ntTSL 2 BASIC15.16■□□□□ 0.02
FREM3P0C091 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.16■□□□□ 0.02
FREM3P0C091 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.16■□□□□ 0.02
FREM3P0C091 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.16■□□□□ 0.02
FREM3P0C091 ACTG1P14-201ENST00000446382 1122 ntBASIC15.16■□□□□ 0.02
FREM3P0C091 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
FREM3P0C091 CYP2A7P1-201ENST00000595391 815 ntBASIC15.16■□□□□ 0.02
FREM3P0C091 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
FREM3P0C091 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC15.16■□□□□ 0.02
FREM3P0C091 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
FREM3P0C091 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC15.16■□□□□ 0.02
FREM3P0C091 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC15.16■□□□□ 0.02
FREM3P0C091 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.16■□□□□ 0.02
FREM3P0C091 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.16■□□□□ 0.02
FREM3P0C091 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC15.16■□□□□ 0.02
FREM3P0C091 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.16■□□□□ 0.02
FREM3P0C091 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC15.16■□□□□ 0.02
FREM3P0C091 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC15.16■□□□□ 0.02
FREM3P0C091 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.16■□□□□ 0.02
FREM3P0C091 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 Z92544.3-201ENST00000624747 417 ntBASIC15.16■□□□□ 0.02
FREM3P0C091 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
FREM3P0C091 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.15■□□□□ 0.02
FREM3P0C091 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FREM3P0C091 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
FREM3P0C091 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
FREM3P0C091 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.15■□□□□ 0.02
FREM3P0C091 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
FREM3P0C091 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC15.15■□□□□ 0.02
FREM3P0C091 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
FREM3P0C091 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
FREM3P0C091 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FREM3P0C091 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.15■□□□□ 0.02
FREM3P0C091 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC15.15■□□□□ 0.02
FREM3P0C091 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC15.15■□□□□ 0.02
FREM3P0C091 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.15■□□□□ 0.02
FREM3P0C091 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
FREM3P0C091 AC074386.1-202ENST00000463561 864 ntBASIC15.15■□□□□ 0.02
FREM3P0C091 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.15■□□□□ 0.02
FREM3P0C091 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms