Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.81
APPP05067 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
APPP05067 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
APPP05067 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
APPP05067 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
APPP05067 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
APPP05067 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
APPP05067 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
APPP05067 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
APPP05067 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
APPP05067 NEK7-201ENST00000367383 586 ntTSL 2 BASIC20.08■□□□□ 0.81
APPP05067 CDK2AP2P3-201ENST00000422476 372 ntBASIC20.08■□□□□ 0.81
APPP05067 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
APPP05067 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.08■□□□□ 0.81
APPP05067 AC005829.1-201ENST00000570002 483 ntBASIC20.08■□□□□ 0.81
APPP05067 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
APPP05067 MIR4492-201ENST00000581627 80 ntBASIC20.08■□□□□ 0.81
APPP05067 C20orf181-201ENST00000623918 480 ntBASIC20.08■□□□□ 0.81
APPP05067 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.8
APPP05067 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
APPP05067 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
APPP05067 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
APPP05067 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
APPP05067 AC006277.1-201ENST00000624348 1610 ntBASIC20.08■□□□□ 0.8
APPP05067 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
APPP05067 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
APPP05067 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APPP05067 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
APPP05067 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.08■□□□□ 0.8
APPP05067 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APPP05067 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
APPP05067 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
APPP05067 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
APPP05067 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
APPP05067 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
APPP05067 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
APPP05067 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
APPP05067 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
APPP05067 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
APPP05067 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 CD82-202ENST00000342935 967 ntTSL 5 BASIC20.07■□□□□ 0.8
APPP05067 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC20.07■□□□□ 0.8
APPP05067 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 MIR1233-2-201ENST00000408138 82 ntBASIC20.07■□□□□ 0.8
APPP05067 MIR1233-1-201ENST00000408722 82 ntBASIC20.07■□□□□ 0.8
APPP05067 FAM58CP-201ENST00000435741 640 ntBASIC20.07■□□□□ 0.8
APPP05067 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.07■□□□□ 0.8
APPP05067 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
APPP05067 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC20.07■□□□□ 0.8
APPP05067 ALG1L5P-201ENST00000482043 771 ntBASIC20.07■□□□□ 0.8
APPP05067 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC20.07■□□□□ 0.8
APPP05067 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.07■□□□□ 0.8
APPP05067 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
APPP05067 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 AP002472.1-201ENST00000577490 586 ntBASIC20.07■□□□□ 0.8
APPP05067 CD7-202ENST00000578509 925 ntTSL 3 BASIC20.07■□□□□ 0.8
APPP05067 AC091812.2-201ENST00000619081 385 ntBASIC20.07■□□□□ 0.8
APPP05067 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC20.07■□□□□ 0.8
APPP05067 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
APPP05067 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 PC-204ENST00000524491 1714 ntTSL 2 BASIC20.07■□□□□ 0.8
APPP05067 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC20.07■□□□□ 0.8
APPP05067 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.07■□□□□ 0.8
APPP05067 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.07■□□□□ 0.8
APPP05067 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
APPP05067 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC20.07■□□□□ 0.8
APPP05067 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
APPP05067 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
APPP05067 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC20.06■□□□□ 0.8
APPP05067 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APPP05067 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
APPP05067 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
APPP05067 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC20.06■□□□□ 0.8
APPP05067 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
APPP05067 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
APPP05067 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
APPP05067 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
APPP05067 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.06■□□□□ 0.8
APPP05067 HTR5BP-201ENST00000430851 1154 ntBASIC20.06■□□□□ 0.8
APPP05067 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC20.06■□□□□ 0.8
APPP05067 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.06■□□□□ 0.8
APPP05067 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.06■□□□□ 0.8
APPP05067 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
APPP05067 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.06■□□□□ 0.8
APPP05067 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
APPP05067 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
APPP05067 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms