Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 GRAP-202ENST00000395635 834 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRNA1P02708 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.07■□□□□ 0.48
CHRNA1P02708 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA1P02708 RNA5SP410-201ENST00000516285 106 ntBASIC18.07■□□□□ 0.48
CHRNA1P02708 COQ6-210ENST00000554920 649 ntTSL 3 BASIC18.07■□□□□ 0.48
CHRNA1P02708 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CHRNA1P02708 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA1P02708 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CHRNA1P02708 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA1P02708 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CHRNA1P02708 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CHRNA1P02708 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.07■□□□□ 0.48
CHRNA1P02708 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA1P02708 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA1P02708 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CHRNA1P02708 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA1P02708 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.06■□□□□ 0.48
CHRNA1P02708 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA1P02708 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CHRNA1P02708 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC18.06■□□□□ 0.48
CHRNA1P02708 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA1P02708 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CHRNA1P02708 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRNA1P02708 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC18.06■□□□□ 0.48
CHRNA1P02708 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA1P02708 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRNA1P02708 AL596325.1-201ENST00000563991 1082 ntBASIC18.06■□□□□ 0.48
CHRNA1P02708 AC004233.3-201ENST00000607794 1269 ntBASIC18.06■□□□□ 0.48
CHRNA1P02708 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA1P02708 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA1P02708 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA1P02708 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA1P02708 AL512652.2-201ENST00000625156 1716 ntBASIC18.06■□□□□ 0.48
CHRNA1P02708 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA1P02708 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA1P02708 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRNA1P02708 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CHRNA1P02708 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.06■□□□□ 0.48
CHRNA1P02708 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.06■□□□□ 0.48
CHRNA1P02708 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC18.06■□□□□ 0.48
CHRNA1P02708 AL645728.1-201ENST00000366221 2101 ntBASIC18.05■□□□□ 0.48
CHRNA1P02708 AL391256.1-201ENST00000443260 1855 ntBASIC18.05■□□□□ 0.48
CHRNA1P02708 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA1P02708 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CHRNA1P02708 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CHRNA1P02708 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA1P02708 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA1P02708 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA1P02708 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA1P02708 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC18.05■□□□□ 0.48
CHRNA1P02708 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.05■□□□□ 0.48
CHRNA1P02708 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.05■□□□□ 0.48
CHRNA1P02708 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA1P02708 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA1P02708 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA1P02708 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA1P02708 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC18.05■□□□□ 0.48
CHRNA1P02708 RAB34-223ENST00000636154 730 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA1P02708 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.05■□□□□ 0.48
CHRNA1P02708 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
CHRNA1P02708 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA1P02708 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA1P02708 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.05■□□□□ 0.48
CHRNA1P02708 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CHRNA1P02708 LTB4R2-202ENST00000528054 3092 ntBASIC18.04■□□□□ 0.48
CHRNA1P02708 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA1P02708 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA1P02708 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHRNA1P02708 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHRNA1P02708 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
CHRNA1P02708 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA1P02708 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHRNA1P02708 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA1P02708 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRNA1P02708 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA1P02708 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA1P02708 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.04■□□□□ 0.48
CHRNA1P02708 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA1P02708 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA1P02708 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA1P02708 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CHRNA1P02708 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
CHRNA1P02708 CALY-202ENST00000368555 783 ntTSL 2 BASIC18.04■□□□□ 0.48
CHRNA1P02708 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA1P02708 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
CHRNA1P02708 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRNA1P02708 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRNA1P02708 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
CHRNA1P02708 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC18.04■□□□□ 0.48
CHRNA1P02708 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA1P02708 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA1P02708 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRNA1P02708 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRNA1P02708 AC027307.3-201ENST00000594262 1100 ntBASIC18.04■□□□□ 0.48
CHRNA1P02708 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRNA1P02708 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC18.04■□□□□ 0.48
CHRNA1P02708 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA1P02708 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.04■□□□□ 0.48
CHRNA1P02708 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
CHRNA1P02708 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms