Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
NKX2-2O95096 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
NKX2-2O95096 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.43■□□□□ 0.06
NKX2-2O95096 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.42■□□□□ 0.06
NKX2-2O95096 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NKX2-2O95096 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.42■□□□□ 0.06
NKX2-2O95096 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC15.42■□□□□ 0.06
NKX2-2O95096 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NKX2-2O95096 BEX3-201ENST00000361298 921 ntTSL 2 BASIC15.42■□□□□ 0.06
NKX2-2O95096 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
NKX2-2O95096 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.42■□□□□ 0.06
NKX2-2O95096 FALEC-201ENST00000416894 566 ntTSL 3 BASIC15.42■□□□□ 0.06
NKX2-2O95096 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC15.42■□□□□ 0.06
NKX2-2O95096 AC007967.2-201ENST00000432613 625 ntBASIC15.42■□□□□ 0.06
NKX2-2O95096 KRT18P2-201ENST00000447938 1258 ntBASIC15.42■□□□□ 0.06
NKX2-2O95096 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.42■□□□□ 0.06
NKX2-2O95096 THTPA-204ENST00000554970 569 ntTSL 4 BASIC15.42■□□□□ 0.06
NKX2-2O95096 THTPA-206ENST00000556015 535 ntTSL 3 BASIC15.42■□□□□ 0.06
NKX2-2O95096 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.42■□□□□ 0.06
NKX2-2O95096 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.42■□□□□ 0.06
NKX2-2O95096 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.42■□□□□ 0.06
NKX2-2O95096 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC15.42■□□□□ 0.06
NKX2-2O95096 AC021097.1-201ENST00000607902 574 ntBASIC15.42■□□□□ 0.06
NKX2-2O95096 AC020765.3-201ENST00000613051 740 ntBASIC15.42■□□□□ 0.06
NKX2-2O95096 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC15.42■□□□□ 0.06
NKX2-2O95096 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NKX2-2O95096 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
NKX2-2O95096 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC15.42■□□□□ 0.06
NKX2-2O95096 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC15.42■□□□□ 0.06
NKX2-2O95096 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
NKX2-2O95096 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
NKX2-2O95096 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC15.42■□□□□ 0.06
NKX2-2O95096 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
NKX2-2O95096 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
NKX2-2O95096 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NKX2-2O95096 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
NKX2-2O95096 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
NKX2-2O95096 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NKX2-2O95096 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX2-2O95096 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
NKX2-2O95096 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NKX2-2O95096 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.41■□□□□ 0.06
NKX2-2O95096 AC006449.5-201ENST00000610658 2098 ntBASIC15.41■□□□□ 0.06
NKX2-2O95096 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX2-2O95096 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NKX2-2O95096 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
NKX2-2O95096 CD99-202ENST00000381180 530 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX2-2O95096 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
NKX2-2O95096 HS6ST1P1-201ENST00000481504 1234 ntBASIC15.41■□□□□ 0.06
NKX2-2O95096 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX2-2O95096 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.41■□□□□ 0.06
NKX2-2O95096 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.41■□□□□ 0.06
NKX2-2O95096 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.41■□□□□ 0.06
NKX2-2O95096 AC018845.2-201ENST00000568326 409 ntBASIC15.41■□□□□ 0.06
NKX2-2O95096 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.41■□□□□ 0.06
NKX2-2O95096 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC15.41■□□□□ 0.06
NKX2-2O95096 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX2-2O95096 NME4-212ENST00000621774 904 ntTSL 3 BASIC15.41■□□□□ 0.06
NKX2-2O95096 AC004877.2-201ENST00000623941 599 ntBASIC15.41■□□□□ 0.06
NKX2-2O95096 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NKX2-2O95096 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.41■□□□□ 0.06
NKX2-2O95096 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX2-2O95096 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
NKX2-2O95096 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX2-2O95096 PCGF3-213ENST00000620529 1899 ntBASIC15.41■□□□□ 0.06
NKX2-2O95096 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC15.41■□□□□ 0.06
NKX2-2O95096 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NKX2-2O95096 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
NKX2-2O95096 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC15.41■□□□□ 0.06
NKX2-2O95096 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
NKX2-2O95096 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
NKX2-2O95096 BCAR1-209ENST00000546196 1340 ntBASIC15.41■□□□□ 0.06
NKX2-2O95096 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
NKX2-2O95096 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 LINC01144-201ENST00000626198 1710 ntBASIC15.4■□□□□ 0.06
NKX2-2O95096 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.4■□□□□ 0.06
NKX2-2O95096 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
NKX2-2O95096 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.4■□□□□ 0.06
NKX2-2O95096 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
NKX2-2O95096 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms