Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM3O75382 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM3O75382 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.68■□□□□ 0.1
TRIM3O75382 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC15.68■□□□□ 0.1
TRIM3O75382 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
TRIM3O75382 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TRIM3O75382 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TRIM3O75382 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
TRIM3O75382 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM3O75382 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM3O75382 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM3O75382 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TRIM3O75382 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM3O75382 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC15.67■□□□□ 0.1
TRIM3O75382 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.67■□□□□ 0.1
TRIM3O75382 CALM1-205ENST00000553542 877 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM3O75382 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM3O75382 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC15.67■□□□□ 0.1
TRIM3O75382 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.67■□□□□ 0.1
TRIM3O75382 AC004790.2-201ENST00000623588 572 ntBASIC15.67■□□□□ 0.1
TRIM3O75382 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM3O75382 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC15.67■□□□□ 0.1
TRIM3O75382 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TRIM3O75382 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC15.67■□□□□ 0.1
TRIM3O75382 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM3O75382 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM3O75382 PCDHA14-201ENST00000506751 2298 ntBASIC15.66■□□□□ 0.1
TRIM3O75382 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM3O75382 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM3O75382 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRIM3O75382 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM3O75382 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM3O75382 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
TRIM3O75382 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM3O75382 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM3O75382 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM3O75382 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM3O75382 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
TRIM3O75382 MIR940-201ENST00000401276 94 ntBASIC15.66■□□□□ 0.1
TRIM3O75382 KRT18P3-201ENST00000451602 1288 ntBASIC15.66■□□□□ 0.1
TRIM3O75382 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM3O75382 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM3O75382 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.66■□□□□ 0.1
TRIM3O75382 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM3O75382 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM3O75382 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM3O75382 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM3O75382 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM3O75382 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM3O75382 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM3O75382 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM3O75382 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.66■□□□□ 0.1
TRIM3O75382 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TRIM3O75382 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM3O75382 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM3O75382 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM3O75382 PMS2P7-201ENST00000506558 1336 ntBASIC15.66■□□□□ 0.1
TRIM3O75382 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
TRIM3O75382 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.66■□□□□ 0.1
TRIM3O75382 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TRIM3O75382 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.65■□□□□ 0.1
TRIM3O75382 PI4KAP1-204ENST00000612579 1703 ntBASIC15.65■□□□□ 0.1
TRIM3O75382 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
TRIM3O75382 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
TRIM3O75382 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM3O75382 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
TRIM3O75382 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.65■□□□□ 0.1
TRIM3O75382 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.65■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms