Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNND1O60716 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.45■□□□□ 0.7
CTNND1O60716 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC19.45■□□□□ 0.7
CTNND1O60716 AC025048.6-201ENST00000634326 1161 ntBASIC19.45■□□□□ 0.7
CTNND1O60716 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNND1O60716 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
CTNND1O60716 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
CTNND1O60716 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNND1O60716 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTNND1O60716 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNND1O60716 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
CTNND1O60716 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CTNND1O60716 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.44■□□□□ 0.7
CTNND1O60716 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC19.44■□□□□ 0.7
CTNND1O60716 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.44■□□□□ 0.7
CTNND1O60716 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 AL671710.1-201ENST00000610245 2349 ntBASIC19.44■□□□□ 0.7
CTNND1O60716 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC19.44■□□□□ 0.7
CTNND1O60716 GK-202ENST00000378941 458 ntTSL 3 BASIC19.44■□□□□ 0.7
CTNND1O60716 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.44■□□□□ 0.7
CTNND1O60716 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.44■□□□□ 0.7
CTNND1O60716 QPRT-203ENST00000562473 579 ntTSL 3 BASIC19.44■□□□□ 0.7
CTNND1O60716 COQ9-214ENST00000567933 882 ntTSL 3 BASIC19.44■□□□□ 0.7
CTNND1O60716 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.44■□□□□ 0.7
CTNND1O60716 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CTNND1O60716 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
CTNND1O60716 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
CTNND1O60716 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC19.44■□□□□ 0.7
CTNND1O60716 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
CTNND1O60716 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CTNND1O60716 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.43■□□□□ 0.7
CTNND1O60716 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
CTNND1O60716 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CTNND1O60716 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.43■□□□□ 0.7
CTNND1O60716 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC19.43■□□□□ 0.7
CTNND1O60716 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CTNND1O60716 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.43■□□□□ 0.7
CTNND1O60716 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CTNND1O60716 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC19.43■□□□□ 0.7
CTNND1O60716 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 CALY-202ENST00000368555 783 ntTSL 2 BASIC19.43■□□□□ 0.7
CTNND1O60716 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.43■□□□□ 0.7
CTNND1O60716 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC19.43■□□□□ 0.7
CTNND1O60716 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.43■□□□□ 0.7
CTNND1O60716 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
CTNND1O60716 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC19.43■□□□□ 0.7
CTNND1O60716 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.43■□□□□ 0.7
CTNND1O60716 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.43■□□□□ 0.7
CTNND1O60716 RN7SL828P-201ENST00000607615 303 ntBASIC19.43■□□□□ 0.7
CTNND1O60716 AC004233.3-201ENST00000607794 1269 ntBASIC19.43■□□□□ 0.7
CTNND1O60716 TEX28P1-201ENST00000613479 1221 ntBASIC19.43■□□□□ 0.7
CTNND1O60716 TEX28P2-201ENST00000617764 1221 ntBASIC19.43■□□□□ 0.7
CTNND1O60716 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.43■□□□□ 0.7
CTNND1O60716 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.43■□□□□ 0.7
CTNND1O60716 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.43■□□□□ 0.7
CTNND1O60716 AC087499.5-201ENST00000452760 1342 ntBASIC19.43■□□□□ 0.7
CTNND1O60716 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 CROCCP2-202ENST00000412962 2773 ntBASIC19.43■□□□□ 0.7
CTNND1O60716 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CTNND1O60716 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.42■□□□□ 0.7
CTNND1O60716 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
CTNND1O60716 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTNND1O60716 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.42■□□□□ 0.7
CTNND1O60716 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNND1O60716 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTNND1O60716 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CTNND1O60716 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CTNND1O60716 CETN4P-206ENST00000642099 2168 ntBASIC19.42■□□□□ 0.7
CTNND1O60716 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
CTNND1O60716 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.42■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms