Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC16■□□□□ 0.15
LCMT2O60294 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCMT2O60294 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LCMT2O60294 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCMT2O60294 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCMT2O60294 RNU1-129P-201ENST00000384064 167 ntBASIC16■□□□□ 0.15
LCMT2O60294 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCMT2O60294 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
LCMT2O60294 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCMT2O60294 NMU-203ENST00000507338 658 ntTSL 3 BASIC16■□□□□ 0.15
LCMT2O60294 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16■□□□□ 0.15
LCMT2O60294 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16■□□□□ 0.15
LCMT2O60294 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16■□□□□ 0.15
LCMT2O60294 U1.21-201ENST00000580816 167 ntBASIC16■□□□□ 0.15
LCMT2O60294 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16■□□□□ 0.15
LCMT2O60294 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC16■□□□□ 0.15
LCMT2O60294 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LCMT2O60294 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
LCMT2O60294 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
LCMT2O60294 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16■□□□□ 0.15
LCMT2O60294 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
LCMT2O60294 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
LCMT2O60294 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16■□□□□ 0.15
LCMT2O60294 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16■□□□□ 0.15
LCMT2O60294 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
LCMT2O60294 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16■□□□□ 0.15
LCMT2O60294 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16■□□□□ 0.15
LCMT2O60294 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16■□□□□ 0.15
LCMT2O60294 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LCMT2O60294 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.99■□□□□ 0.15
LCMT2O60294 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.99■□□□□ 0.15
LCMT2O60294 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.99■□□□□ 0.15
LCMT2O60294 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.99■□□□□ 0.15
LCMT2O60294 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LCMT2O60294 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.99■□□□□ 0.15
LCMT2O60294 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.99■□□□□ 0.15
LCMT2O60294 WDR53-204ENST00000433160 887 ntTSL 5 BASIC15.99■□□□□ 0.15
LCMT2O60294 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 HLA-J-202ENST00000469281 1241 ntBASIC15.99■□□□□ 0.15
LCMT2O60294 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC15.99■□□□□ 0.15
LCMT2O60294 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.99■□□□□ 0.15
LCMT2O60294 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LCMT2O60294 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LCMT2O60294 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LCMT2O60294 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
LCMT2O60294 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
LCMT2O60294 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.99■□□□□ 0.15
LCMT2O60294 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.99■□□□□ 0.15
LCMT2O60294 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.99■□□□□ 0.15
LCMT2O60294 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC15.99■□□□□ 0.15
LCMT2O60294 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.99■□□□□ 0.15
LCMT2O60294 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC15.99■□□□□ 0.15
LCMT2O60294 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
LCMT2O60294 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC15.98■□□□□ 0.15
LCMT2O60294 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.98■□□□□ 0.15
LCMT2O60294 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.98■□□□□ 0.15
LCMT2O60294 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LCMT2O60294 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
LCMT2O60294 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC15.98■□□□□ 0.15
LCMT2O60294 PMP22-202ENST00000395936 816 ntTSL 3 BASIC15.98■□□□□ 0.15
LCMT2O60294 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC15.98■□□□□ 0.15
LCMT2O60294 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 AC140658.5-201ENST00000438532 169 ntBASIC15.98■□□□□ 0.15
LCMT2O60294 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC15.98■□□□□ 0.15
LCMT2O60294 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.98■□□□□ 0.15
LCMT2O60294 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC15.98■□□□□ 0.15
LCMT2O60294 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC15.98■□□□□ 0.15
LCMT2O60294 AP002472.1-201ENST00000577490 586 ntBASIC15.98■□□□□ 0.15
LCMT2O60294 CD7-202ENST00000578509 925 ntTSL 3 BASIC15.98■□□□□ 0.15
LCMT2O60294 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
LCMT2O60294 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms