Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC17.04■□□□□ 0.32
RIPK2O43353 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC17.04■□□□□ 0.32
RIPK2O43353 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC17.04■□□□□ 0.32
RIPK2O43353 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
RIPK2O43353 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC17.04■□□□□ 0.32
RIPK2O43353 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
RIPK2O43353 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
RIPK2O43353 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.03■□□□□ 0.32
RIPK2O43353 AC073347.1-201ENST00000421633 2643 ntBASIC17.03■□□□□ 0.32
RIPK2O43353 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RIPK2O43353 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
RIPK2O43353 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
RIPK2O43353 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
RIPK2O43353 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
RIPK2O43353 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.03■□□□□ 0.32
RIPK2O43353 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.03■□□□□ 0.32
RIPK2O43353 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.03■□□□□ 0.32
RIPK2O43353 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.03■□□□□ 0.32
RIPK2O43353 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.03■□□□□ 0.32
RIPK2O43353 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.03■□□□□ 0.32
RIPK2O43353 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC17.03■□□□□ 0.32
RIPK2O43353 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.03■□□□□ 0.32
RIPK2O43353 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.03■□□□□ 0.32
RIPK2O43353 AC022532.1-201ENST00000624563 1728 ntBASIC17.03■□□□□ 0.32
RIPK2O43353 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.03■□□□□ 0.32
RIPK2O43353 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC17.03■□□□□ 0.32
RIPK2O43353 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
RIPK2O43353 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
RIPK2O43353 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
RIPK2O43353 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.02■□□□□ 0.32
RIPK2O43353 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.02■□□□□ 0.32
RIPK2O43353 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC17.02■□□□□ 0.32
RIPK2O43353 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RIPK2O43353 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
RIPK2O43353 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.02■□□□□ 0.32
RIPK2O43353 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RIPK2O43353 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 REXO1L8P-201ENST00000604378 1897 ntBASIC17.02■□□□□ 0.32
RIPK2O43353 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
RIPK2O43353 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC17.02■□□□□ 0.32
RIPK2O43353 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC17.02■□□□□ 0.32
RIPK2O43353 AC063952.2-201ENST00000498792 1227 ntBASIC17.02■□□□□ 0.32
RIPK2O43353 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.02■□□□□ 0.32
RIPK2O43353 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.02■□□□□ 0.32
RIPK2O43353 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17.02■□□□□ 0.32
RIPK2O43353 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
RIPK2O43353 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.02■□□□□ 0.32
RIPK2O43353 FER1L4-210ENST00000615531 5998 ntBASIC17.02■□□□□ 0.32
RIPK2O43353 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
RIPK2O43353 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC17.02■□□□□ 0.32
RIPK2O43353 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RIPK2O43353 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RIPK2O43353 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RIPK2O43353 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RIPK2O43353 SIGLEC16-201ENST00000599858 1437 ntBASIC17.02■□□□□ 0.31
RIPK2O43353 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
RIPK2O43353 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RIPK2O43353 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RIPK2O43353 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RIPK2O43353 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
RIPK2O43353 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
RIPK2O43353 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.02■□□□□ 0.31
RIPK2O43353 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
RIPK2O43353 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.02■□□□□ 0.31
RIPK2O43353 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
RIPK2O43353 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.01■□□□□ 0.31
RIPK2O43353 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms