Protein–RNA interactions for Protein: O43294

TGFB1I1, Transforming growth factor beta-1-induced transcript 1 protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1I1O43294 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
TGFB1I1O43294 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFB1I1O43294 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
TGFB1I1O43294 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC18.2■□□□□ 0.5
TGFB1I1O43294 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.2■□□□□ 0.5
TGFB1I1O43294 AC023274.1-201ENST00000418278 595 ntBASIC18.2■□□□□ 0.5
TGFB1I1O43294 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC18.2■□□□□ 0.5
TGFB1I1O43294 SMN2-210ENST00000511812 867 ntTSL 2 BASIC18.2■□□□□ 0.5
TGFB1I1O43294 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC18.2■□□□□ 0.5
TGFB1I1O43294 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
TGFB1I1O43294 AP002472.1-201ENST00000577490 586 ntBASIC18.2■□□□□ 0.5
TGFB1I1O43294 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.2■□□□□ 0.5
TGFB1I1O43294 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC18.2■□□□□ 0.5
TGFB1I1O43294 AC021097.1-201ENST00000607902 574 ntBASIC18.2■□□□□ 0.5
TGFB1I1O43294 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFB1I1O43294 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFB1I1O43294 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
TGFB1I1O43294 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFB1I1O43294 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
TGFB1I1O43294 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFB1I1O43294 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFB1I1O43294 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC18.2■□□□□ 0.5
TGFB1I1O43294 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFB1I1O43294 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
TGFB1I1O43294 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.19■□□□□ 0.5
TGFB1I1O43294 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.19■□□□□ 0.5
TGFB1I1O43294 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.19■□□□□ 0.5
TGFB1I1O43294 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.19■□□□□ 0.5
TGFB1I1O43294 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TGFB1I1O43294 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.19■□□□□ 0.5
TGFB1I1O43294 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC18.19■□□□□ 0.5
TGFB1I1O43294 PCGF3-213ENST00000620529 1899 ntBASIC18.19■□□□□ 0.5
TGFB1I1O43294 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TGFB1I1O43294 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.19■□□□□ 0.5
TGFB1I1O43294 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
TGFB1I1O43294 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
TGFB1I1O43294 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
TGFB1I1O43294 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TGFB1I1O43294 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TGFB1I1O43294 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TGFB1I1O43294 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TGFB1I1O43294 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TGFB1I1O43294 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TGFB1I1O43294 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TGFB1I1O43294 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TGFB1I1O43294 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
TGFB1I1O43294 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TGFB1I1O43294 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 AC068137.2-201ENST00000605408 478 ntBASIC18.18■□□□□ 0.5
TGFB1I1O43294 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TGFB1I1O43294 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
TGFB1I1O43294 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 REM2-202ENST00000536884 1331 ntTSL 2 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
TGFB1I1O43294 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC18.18■□□□□ 0.5
TGFB1I1O43294 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
TGFB1I1O43294 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.17■□□□□ 0.5
TGFB1I1O43294 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TGFB1I1O43294 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
TGFB1I1O43294 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
TGFB1I1O43294 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.17■□□□□ 0.5
TGFB1I1O43294 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
TGFB1I1O43294 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
TGFB1I1O43294 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
TGFB1I1O43294 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms