Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC19.94■□□□□ 0.78
FOXN1O15353 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
FOXN1O15353 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
FOXN1O15353 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXN1O15353 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
FOXN1O15353 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXN1O15353 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXN1O15353 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
FOXN1O15353 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
FOXN1O15353 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
FOXN1O15353 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC19.93■□□□□ 0.78
FOXN1O15353 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC19.93■□□□□ 0.78
FOXN1O15353 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXN1O15353 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FOXN1O15353 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
FOXN1O15353 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC19.93■□□□□ 0.78
FOXN1O15353 COX11-210ENST00000639671 696 ntBASIC19.93■□□□□ 0.78
FOXN1O15353 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
FOXN1O15353 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
FOXN1O15353 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
FOXN1O15353 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC19.93■□□□□ 0.78
FOXN1O15353 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
FOXN1O15353 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.93■□□□□ 0.78
FOXN1O15353 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.93■□□□□ 0.78
FOXN1O15353 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
FOXN1O15353 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC19.92■□□□□ 0.78
FOXN1O15353 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC19.92■□□□□ 0.78
FOXN1O15353 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
FOXN1O15353 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.92■□□□□ 0.78
FOXN1O15353 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC19.92■□□□□ 0.78
FOXN1O15353 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC19.92■□□□□ 0.78
FOXN1O15353 ACTBP11-201ENST00000436287 1126 ntBASIC19.92■□□□□ 0.78
FOXN1O15353 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 AC011495.1-201ENST00000498085 584 ntBASIC19.92■□□□□ 0.78
FOXN1O15353 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
FOXN1O15353 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 AC129492.6-201ENST00000611383 1305 ntBASIC19.92■□□□□ 0.78
FOXN1O15353 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
FOXN1O15353 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
FOXN1O15353 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.92■□□□□ 0.78
FOXN1O15353 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.92■□□□□ 0.78
FOXN1O15353 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
FOXN1O15353 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
FOXN1O15353 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
FOXN1O15353 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN1O15353 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN1O15353 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC19.91■□□□□ 0.78
FOXN1O15353 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXN1O15353 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
FOXN1O15353 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.91■□□□□ 0.78
FOXN1O15353 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXN1O15353 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN1O15353 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
FOXN1O15353 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN1O15353 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC19.91■□□□□ 0.78
FOXN1O15353 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXN1O15353 KRT223P-202ENST00000449164 1292 ntBASIC19.91■□□□□ 0.78
FOXN1O15353 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC19.91■□□□□ 0.78
FOXN1O15353 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXN1O15353 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC19.91■□□□□ 0.78
FOXN1O15353 RN7SL190P-201ENST00000582519 257 ntBASIC19.91■□□□□ 0.78
FOXN1O15353 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN1O15353 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN1O15353 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC19.91■□□□□ 0.78
FOXN1O15353 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
FOXN1O15353 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXN1O15353 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXN1O15353 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC19.91■□□□□ 0.78
FOXN1O15353 PRORSD1P-202ENST00000563365 2154 ntBASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms