Protein–RNA interactions for Protein: O15041

SEMA3E, Semaphorin-3E, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3EO15041 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC20.03■□□□□ 0.8
SEMA3EO15041 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
SEMA3EO15041 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA3EO15041 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA3EO15041 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA3EO15041 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC20.03■□□□□ 0.8
SEMA3EO15041 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA3EO15041 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.03■□□□□ 0.8
SEMA3EO15041 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC20.03■□□□□ 0.8
SEMA3EO15041 AC093214.1-201ENST00000511688 1107 ntBASIC20.03■□□□□ 0.8
SEMA3EO15041 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC20.03■□□□□ 0.8
SEMA3EO15041 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC20.03■□□□□ 0.8
SEMA3EO15041 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC20.03■□□□□ 0.8
SEMA3EO15041 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
SEMA3EO15041 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA3EO15041 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.03■□□□□ 0.8
SEMA3EO15041 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.03■□□□□ 0.8
SEMA3EO15041 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA3EO15041 FO538757.1-201ENST00000623083 1397 ntBASIC20.03■□□□□ 0.8
SEMA3EO15041 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEMA3EO15041 AC006538.1-201ENST00000567905 1585 ntBASIC20.03■□□□□ 0.8
SEMA3EO15041 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
SEMA3EO15041 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC20.03■□□□□ 0.8
SEMA3EO15041 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC20.03■□□□□ 0.8
SEMA3EO15041 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC20.03■□□□□ 0.8
SEMA3EO15041 AP001094.4-201ENST00000579008 2176 ntBASIC20.02■□□□□ 0.8
SEMA3EO15041 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA3EO15041 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC20.02■□□□□ 0.8
SEMA3EO15041 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA3EO15041 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA3EO15041 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA3EO15041 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
SEMA3EO15041 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.02■□□□□ 0.8
SEMA3EO15041 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA3EO15041 TREML5P-201ENST00000421694 576 ntBASIC20.02■□□□□ 0.8
SEMA3EO15041 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA3EO15041 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA3EO15041 HTR7P1-202ENST00000624664 4411 ntBASIC20.02■□□□□ 0.8
SEMA3EO15041 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
SEMA3EO15041 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SEMA3EO15041 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA3EO15041 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA3EO15041 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA3EO15041 GPAA1P2-202ENST00000606848 1787 ntBASIC20.02■□□□□ 0.8
SEMA3EO15041 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA3EO15041 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA3EO15041 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.02■□□□□ 0.8
SEMA3EO15041 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA3EO15041 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
SEMA3EO15041 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEMA3EO15041 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SEMA3EO15041 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.02■□□□□ 0.79
SEMA3EO15041 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SEMA3EO15041 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SEMA3EO15041 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.79
SEMA3EO15041 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA3EO15041 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA3EO15041 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA3EO15041 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SEMA3EO15041 AMT-206ENST00000458307 1860 ntTSL 2 BASIC20.01■□□□□ 0.79
SEMA3EO15041 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC20.01■□□□□ 0.79
SEMA3EO15041 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SEMA3EO15041 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA3EO15041 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA3EO15041 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA3EO15041 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA3EO15041 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA3EO15041 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
SEMA3EO15041 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC20.01■□□□□ 0.79
SEMA3EO15041 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.01■□□□□ 0.79
SEMA3EO15041 AC093724.1-201ENST00000448659 1027 ntBASIC20.01■□□□□ 0.79
SEMA3EO15041 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC20.01■□□□□ 0.79
SEMA3EO15041 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.01■□□□□ 0.79
SEMA3EO15041 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC20.01■□□□□ 0.79
SEMA3EO15041 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC20.01■□□□□ 0.79
SEMA3EO15041 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC20.01■□□□□ 0.79
SEMA3EO15041 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC20.01■□□□□ 0.79
SEMA3EO15041 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA3EO15041 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SEMA3EO15041 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
SEMA3EO15041 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC20.01■□□□□ 0.79
SEMA3EO15041 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SEMA3EO15041 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA3EO15041 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA3EO15041 AL031731.1-201ENST00000642131 2094 ntBASIC20.01■□□□□ 0.79
SEMA3EO15041 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA3EO15041 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC20.01■□□□□ 0.79
SEMA3EO15041 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
SEMA3EO15041 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SEMA3EO15041 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SEMA3EO15041 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.01■□□□□ 0.79
SEMA3EO15041 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.01■□□□□ 0.79
SEMA3EO15041 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
SEMA3EO15041 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC20■□□□□ 0.79
SEMA3EO15041 GRAMD4P3-201ENST00000621665 1669 ntBASIC20■□□□□ 0.79
SEMA3EO15041 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SEMA3EO15041 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
SEMA3EO15041 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC20■□□□□ 0.79
SEMA3EO15041 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20■□□□□ 0.79
SEMA3EO15041 GOLGA2P9-201ENST00000596977 1937 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms