Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ATP2A1O14983 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ATP2A1O14983 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
ATP2A1O14983 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.09■□□□□ 0.65
ATP2A1O14983 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP2A1O14983 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP2A1O14983 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC19.09■□□□□ 0.65
ATP2A1O14983 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.09■□□□□ 0.65
ATP2A1O14983 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP2A1O14983 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC19.09■□□□□ 0.65
ATP2A1O14983 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC19.09■□□□□ 0.65
ATP2A1O14983 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP2A1O14983 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP2A1O14983 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.09■□□□□ 0.65
ATP2A1O14983 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
ATP2A1O14983 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 SNX33P1-201ENST00000592116 1762 ntBASIC19.09■□□□□ 0.65
ATP2A1O14983 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
ATP2A1O14983 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
ATP2A1O14983 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATP2A1O14983 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC19.08■□□□□ 0.65
ATP2A1O14983 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATP2A1O14983 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC19.08■□□□□ 0.65
ATP2A1O14983 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC19.08■□□□□ 0.65
ATP2A1O14983 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
ATP2A1O14983 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC19.08■□□□□ 0.65
ATP2A1O14983 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A1O14983 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A1O14983 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC19.08■□□□□ 0.64
ATP2A1O14983 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A1O14983 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A1O14983 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A1O14983 FAM207CP-201ENST00000443486 507 ntBASIC19.08■□□□□ 0.64
ATP2A1O14983 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.08■□□□□ 0.64
ATP2A1O14983 PRYP6-201ENST00000514804 343 ntBASIC19.08■□□□□ 0.64
ATP2A1O14983 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A1O14983 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A1O14983 AC007967.4-201ENST00000614700 386 ntBASIC19.08■□□□□ 0.64
ATP2A1O14983 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A1O14983 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A1O14983 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC19.08■□□□□ 0.64
ATP2A1O14983 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
ATP2A1O14983 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.08■□□□□ 0.64
ATP2A1O14983 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.08■□□□□ 0.64
ATP2A1O14983 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A1O14983 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
ATP2A1O14983 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.08■□□□□ 0.64
ATP2A1O14983 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ATP2A1O14983 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC19.07■□□□□ 0.64
ATP2A1O14983 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
ATP2A1O14983 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATP2A1O14983 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
ATP2A1O14983 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
ATP2A1O14983 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ATP2A1O14983 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 MIR661-201ENST00000384842 89 ntBASIC19.07■□□□□ 0.64
ATP2A1O14983 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP2A1O14983 UGT1A2P-201ENST00000454886 866 ntBASIC19.07■□□□□ 0.64
ATP2A1O14983 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC19.07■□□□□ 0.64
ATP2A1O14983 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC19.07■□□□□ 0.64
ATP2A1O14983 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC19.07■□□□□ 0.64
ATP2A1O14983 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP2A1O14983 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC19.07■□□□□ 0.64
ATP2A1O14983 AL390754.1-201ENST00000619088 582 ntBASIC19.07■□□□□ 0.64
ATP2A1O14983 AL139011.1-202ENST00000642063 584 ntBASIC19.07■□□□□ 0.64
ATP2A1O14983 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
ATP2A1O14983 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 KRT8P39-201ENST00000396270 1433 ntBASIC19.07■□□□□ 0.64
ATP2A1O14983 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
ATP2A1O14983 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.07■□□□□ 0.64
ATP2A1O14983 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
ATP2A1O14983 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
ATP2A1O14983 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms