Protein–RNA interactions for Protein: O14828

SCAMP3, Secretory carrier-associated membrane protein 3, humanhuman

Known RBP Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3O14828 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP3O14828 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC17.3■□□□□ 0.36
SCAMP3O14828 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC17.3■□□□□ 0.36
SCAMP3O14828 AC109635.5-201ENST00000533593 962 ntBASIC17.3■□□□□ 0.36
SCAMP3O14828 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SCAMP3O14828 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.3■□□□□ 0.36
SCAMP3O14828 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.3■□□□□ 0.36
SCAMP3O14828 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC17.3■□□□□ 0.36
SCAMP3O14828 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SCAMP3O14828 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SCAMP3O14828 MIR4492-201ENST00000581627 80 ntBASIC17.3■□□□□ 0.36
SCAMP3O14828 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.3■□□□□ 0.36
SCAMP3O14828 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SCAMP3O14828 AP001350.2-201ENST00000625104 1094 ntBASIC17.3■□□□□ 0.36
SCAMP3O14828 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP3O14828 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP3O14828 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP3O14828 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SCAMP3O14828 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP3O14828 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SCAMP3O14828 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC17.29■□□□□ 0.36
SCAMP3O14828 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.29■□□□□ 0.36
SCAMP3O14828 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.29■□□□□ 0.36
SCAMP3O14828 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.29■□□□□ 0.36
SCAMP3O14828 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.29■□□□□ 0.36
SCAMP3O14828 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.29■□□□□ 0.36
SCAMP3O14828 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC17.29■□□□□ 0.36
SCAMP3O14828 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.29■□□□□ 0.36
SCAMP3O14828 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.29■□□□□ 0.36
SCAMP3O14828 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.29■□□□□ 0.36
SCAMP3O14828 LINC01225-203ENST00000563550 1244 ntBASIC17.29■□□□□ 0.36
SCAMP3O14828 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.29■□□□□ 0.36
SCAMP3O14828 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.29■□□□□ 0.36
SCAMP3O14828 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.29■□□□□ 0.36
SCAMP3O14828 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC17.29■□□□□ 0.36
SCAMP3O14828 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
SCAMP3O14828 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SCAMP3O14828 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SCAMP3O14828 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP3O14828 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.28■□□□□ 0.36
SCAMP3O14828 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC17.28■□□□□ 0.36
SCAMP3O14828 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP3O14828 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP3O14828 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SCAMP3O14828 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.28■□□□□ 0.36
SCAMP3O14828 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP3O14828 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC17.28■□□□□ 0.36
SCAMP3O14828 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP3O14828 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.28■□□□□ 0.36
SCAMP3O14828 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.28■□□□□ 0.36
SCAMP3O14828 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.28■□□□□ 0.36
SCAMP3O14828 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SCAMP3O14828 AC027307.2-201ENST00000591252 911 ntBASIC17.28■□□□□ 0.36
SCAMP3O14828 AL390955.2-201ENST00000603032 514 ntBASIC17.28■□□□□ 0.36
SCAMP3O14828 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SCAMP3O14828 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.28■□□□□ 0.36
SCAMP3O14828 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.28■□□□□ 0.36
SCAMP3O14828 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
SCAMP3O14828 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
SCAMP3O14828 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP3O14828 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SCAMP3O14828 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC17.28■□□□□ 0.36
SCAMP3O14828 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP3O14828 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP3O14828 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SCAMP3O14828 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.27■□□□□ 0.36
SCAMP3O14828 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.27■□□□□ 0.36
SCAMP3O14828 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.27■□□□□ 0.36
SCAMP3O14828 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP3O14828 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP3O14828 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP3O14828 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC17.27■□□□□ 0.36
SCAMP3O14828 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SCAMP3O14828 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.27■□□□□ 0.36
SCAMP3O14828 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms