Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
TRIM38O00635 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM38O00635 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM38O00635 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM38O00635 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TRIM38O00635 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM38O00635 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM38O00635 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM38O00635 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM38O00635 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.89■□□□□ 0.29
TRIM38O00635 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.89■□□□□ 0.29
TRIM38O00635 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM38O00635 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM38O00635 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TRIM38O00635 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM38O00635 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
TRIM38O00635 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.89■□□□□ 0.29
TRIM38O00635 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM38O00635 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TRIM38O00635 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM38O00635 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM38O00635 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM38O00635 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 PI4KAP1-204ENST00000612579 1703 ntBASIC16.88■□□□□ 0.29
TRIM38O00635 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.88■□□□□ 0.29
TRIM38O00635 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 AL645939.2-201ENST00000427340 991 ntBASIC16.88■□□□□ 0.29
TRIM38O00635 FAM58CP-201ENST00000435741 640 ntBASIC16.88■□□□□ 0.29
TRIM38O00635 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM38O00635 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRIM38O00635 AC074386.1-202ENST00000463561 864 ntBASIC16.88■□□□□ 0.29
TRIM38O00635 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRIM38O00635 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM38O00635 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.88■□□□□ 0.29
TRIM38O00635 AC027612.4-201ENST00000605371 583 ntBASIC16.88■□□□□ 0.29
TRIM38O00635 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM38O00635 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM38O00635 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.88■□□□□ 0.29
TRIM38O00635 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM38O00635 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.88■□□□□ 0.29
TRIM38O00635 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM38O00635 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
TRIM38O00635 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
TRIM38O00635 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
TRIM38O00635 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TRIM38O00635 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TRIM38O00635 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM38O00635 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 AC005915.1-201ENST00000624912 2018 ntBASIC16.87■□□□□ 0.29
TRIM38O00635 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRIM38O00635 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM38O00635 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM38O00635 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 MYCLP1-201ENST00000372451 1075 ntBASIC16.87■□□□□ 0.29
TRIM38O00635 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM38O00635 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM38O00635 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.87■□□□□ 0.29
TRIM38O00635 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
TRIM38O00635 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM38O00635 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM38O00635 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.87■□□□□ 0.29
TRIM38O00635 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC16.87■□□□□ 0.29
TRIM38O00635 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
TRIM38O00635 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM38O00635 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM38O00635 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
TRIM38O00635 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC16.87■□□□□ 0.29
TRIM38O00635 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
TRIM38O00635 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
TRIM38O00635 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms