Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
TLR4O00206 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TLR4O00206 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.57■□□□□ 0.24
TLR4O00206 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TLR4O00206 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 AL023806.1-201ENST00000603994 1649 ntBASIC16.57■□□□□ 0.24
TLR4O00206 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.57■□□□□ 0.24
TLR4O00206 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
TLR4O00206 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TLR4O00206 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC16.57■□□□□ 0.24
TLR4O00206 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.57■□□□□ 0.24
TLR4O00206 SPDYE7P-202ENST00000420373 878 ntBASIC16.57■□□□□ 0.24
TLR4O00206 AC107890.1-201ENST00000422478 521 ntBASIC16.57■□□□□ 0.24
TLR4O00206 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.57■□□□□ 0.24
TLR4O00206 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TLR4O00206 MIR3909-201ENST00000579518 119 ntBASIC16.57■□□□□ 0.24
TLR4O00206 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 AC138761.1-201ENST00000584393 385 ntBASIC16.57■□□□□ 0.24
TLR4O00206 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 AC008267.7-201ENST00000624570 1194 ntBASIC16.57■□□□□ 0.24
TLR4O00206 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
TLR4O00206 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TLR4O00206 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 AD000864.1-201ENST00000624076 2295 ntBASIC16.57■□□□□ 0.24
TLR4O00206 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TLR4O00206 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.56■□□□□ 0.24
TLR4O00206 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TLR4O00206 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TLR4O00206 AC008677.1-201ENST00000519230 1561 ntBASIC16.56■□□□□ 0.24
TLR4O00206 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.56■□□□□ 0.24
TLR4O00206 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TLR4O00206 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TLR4O00206 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TLR4O00206 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TLR4O00206 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TLR4O00206 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.56■□□□□ 0.24
TLR4O00206 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.56■□□□□ 0.24
TLR4O00206 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TLR4O00206 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TLR4O00206 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TLR4O00206 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TLR4O00206 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.56■□□□□ 0.24
TLR4O00206 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC16.56■□□□□ 0.24
TLR4O00206 SPDYE14P-201ENST00000442619 822 ntBASIC16.56■□□□□ 0.24
TLR4O00206 AC125807.1-201ENST00000483097 614 ntBASIC16.56■□□□□ 0.24
TLR4O00206 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.56■□□□□ 0.24
TLR4O00206 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TLR4O00206 MPDU1-223ENST00000582151 728 ntBASIC16.56■□□□□ 0.24
TLR4O00206 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.56■□□□□ 0.24
TLR4O00206 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC16.56■□□□□ 0.24
TLR4O00206 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.56■□□□□ 0.24
TLR4O00206 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.56■□□□□ 0.24
TLR4O00206 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TLR4O00206 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TLR4O00206 AC131009.4-201ENST00000624048 1740 ntBASIC16.56■□□□□ 0.24
TLR4O00206 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TLR4O00206 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TLR4O00206 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TLR4O00206 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TLR4O00206 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
TLR4O00206 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TLR4O00206 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 AL021920.2-201ENST00000624828 1351 ntBASIC16.55■□□□□ 0.24
TLR4O00206 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.55■□□□□ 0.24
TLR4O00206 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
TLR4O00206 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TLR4O00206 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC16.55■□□□□ 0.24
TLR4O00206 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.55■□□□□ 0.24
TLR4O00206 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.55■□□□□ 0.24
TLR4O00206 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.55■□□□□ 0.24
TLR4O00206 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms