Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 MFF-205ENST00000354503 1085 ntTSL 2 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 DUSP5P2-201ENST00000426873 1033 ntBASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 TUBB8P6-201ENST00000436895 1288 ntBASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 BEND3P1-201ENST00000421591 1944 ntBASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 GSN-215ENST00000545652 2428 ntTSL 2 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.64□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 NCF1B-203ENST00000435988 1254 ntBASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 OR2A1-AS1-201ENST00000462305 773 ntBASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 AL160286.2-201ENST00000567150 934 ntBASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 MIR4758-201ENST00000577688 71 ntBASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 SP100-205ENST00000409824 1802 ntTSL 5 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 SPDYE16-203ENST00000633306 2591 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.62□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.62□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
BOLA2-SMG1P6H3BVE0 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms