Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA2E9PIF3 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC15.27■□□□□ 0.03
NPIPA2E9PIF3 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
NPIPA2E9PIF3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 HARS-203ENST00000431330 1774 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 AC092053.1-201ENST00000605787 1936 ntBASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 AC004461.1-201ENST00000412461 403 ntBASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 TSEN15P1-201ENST00000423257 515 ntBASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 AL645939.2-201ENST00000427340 991 ntBASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 RFPL4AP1-201ENST00000530883 850 ntBASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 AC004449.1-201ENST00000564240 433 ntBASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 AC106028.4-201ENST00000614509 607 ntBASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 AL513210.1-201ENST00000629608 234 ntBASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
NPIPA2E9PIF3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 TIMM8BP1-201ENST00000452384 211 ntBASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 MIR4515-201ENST00000584082 81 ntBASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
NPIPA2E9PIF3 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
NPIPA2E9PIF3 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms