Protein–RNA interactions for Protein: A6NLF2

ELOA3D, Elongin-A3 member D, humanhuman

Predicted RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELOA3DA6NLF2 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
ELOA3DA6NLF2 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.37■□□□□ 0.05
ELOA3DA6NLF2 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
ELOA3DA6NLF2 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 AL022342.1-201ENST00000400363 863 ntBASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 RNPS1P1-201ENST00000507437 918 ntBASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 VPS51-217ENST00000639871 243 ntTSL 5 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
ELOA3DA6NLF2 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 INIP-202ENST00000374236 874 ntTSL 2 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 FAM197Y8-203ENST00000450145 560 ntBASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 AF186996.4-201ENST00000467186 377 ntBASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 RPS15P9-201ENST00000494093 319 ntBASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 AC136632.2-201ENST00000512891 861 ntBASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 GGTLC5P-201ENST00000617623 998 ntBASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 AC006277.1-201ENST00000624348 1610 ntBASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.35■□□□□ 0.05
ELOA3DA6NLF2 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ELOA3DA6NLF2 PC-204ENST00000524491 1714 ntTSL 2 BASIC15.34■□□□□ 0.05
ELOA3DA6NLF2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms