Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC23.83■■□□□ 1.4
CCDC144AA2RUR9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC23.83■■□□□ 1.4
CCDC144AA2RUR9 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.4
CCDC144AA2RUR9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC23.83■■□□□ 1.4
CCDC144AA2RUR9 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC23.83■■□□□ 1.4
CCDC144AA2RUR9 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC23.83■■□□□ 1.4
CCDC144AA2RUR9 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC144AA2RUR9 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 AC105020.1-201ENST00000435356 2205 ntBASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 AL133215.2-201ENST00000609242 977 ntBASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 AF228730.6-201ENST00000641497 218 ntBASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 AC084121.3-201ENST00000641716 218 ntBASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 AC105233.6-201ENST00000642093 218 ntBASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC144AA2RUR9 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 AC105021.1-202ENST00000570572 669 ntBASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 AC022144.1-201ENST00000602255 1580 ntBASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
CCDC144AA2RUR9 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 HNRNPA3P1-201ENST00000401429 1139 ntBASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 AC009477.1-201ENST00000452936 217 ntBASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 HNRNPA3P5-201ENST00000455201 833 ntBASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 AL512638.1-201ENST00000457493 794 ntBASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 CCDC74BP1-201ENST00000508880 1123 ntBASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 PUDP-206ENST00000540122 825 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 MAX-210ENST00000555419 765 ntTSL 5 BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 AC061975.2-201ENST00000581722 295 ntBASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 LINC02560-201ENST00000596379 459 ntBASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 AL844908.2-201ENST00000609461 460 ntBASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 AL035252.4-201ENST00000624174 288 ntBASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 CETN4P-206ENST00000642099 2168 ntBASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 AL589702.1-201ENST00000641229 1509 ntBASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC23.8■■□□□ 1.4
CCDC144AA2RUR9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC144AA2RUR9 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms