Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC023274.1-201ENST00000418278 595 ntBASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC010327.4-202ENST00000591484 748 ntBASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.51□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 LINC00982-205ENST00000420957 435 ntBASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 CD63-210ENST00000550776 870 ntTSL 5 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TCRBV4S1A1TA0A5B7 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms