Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 FAM220CP-201ENST00000395253 831 ntBASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 KRT18P13-201ENST00000400056 1290 ntBASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 AC034105.1-201ENST00000563488 319 ntBASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 BX276092.7-203ENST00000637198 1536 ntBASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
DDX49Q9Y6V7 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 RNA5SP415-201ENST00000517246 115 ntBASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 RNF151-202ENST00000569210 853 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 TSPY26P-202ENST00000565928 3884 ntBASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 AC093525.9-201ENST00000624961 1746 ntBASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
DDX49Q9Y6V7 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 PGAM5P1-201ENST00000518923 814 ntBASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 AC140113.2-201ENST00000604370 208 ntBASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
DDX49Q9Y6V7 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 71.1 ms