Protein–RNA interactions for Protein: Q9Y6F1

PARP3, Poly [ADP-ribose] polymerase 3, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARP3Q9Y6F1 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC20.81■□□□□ 0.92
PARP3Q9Y6F1 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PARP3Q9Y6F1 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC20.81■□□□□ 0.92
PARP3Q9Y6F1 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
PARP3Q9Y6F1 AC004790.1-201ENST00000612686 536 ntBASIC20.81■□□□□ 0.92
PARP3Q9Y6F1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.81■□□□□ 0.92
PARP3Q9Y6F1 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
PARP3Q9Y6F1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PARP3Q9Y6F1 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
PARP3Q9Y6F1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PARP3Q9Y6F1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
PARP3Q9Y6F1 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
PARP3Q9Y6F1 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 AC073439.1-201ENST00000624121 1774 ntBASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 RN7SL837P-201ENST00000463010 287 ntBASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 AC098859.1-201ENST00000502915 1238 ntBASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 SLC7A15P-201ENST00000424028 1363 ntBASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PARP3Q9Y6F1 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 TTTY23B-201ENST00000442790 549 ntBASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 GLI4-203ENST00000517468 963 ntTSL 5 BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PARP3Q9Y6F1 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 AC044860.1-202ENST00000559481 777 ntBASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
PARP3Q9Y6F1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
PARP3Q9Y6F1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PARP3Q9Y6F1 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC20.77■□□□□ 0.92
PARP3Q9Y6F1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PARP3Q9Y6F1 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PARP3Q9Y6F1 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PARP3Q9Y6F1 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms