Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 AP002472.1-201ENST00000577490 586 ntBASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 MTDHP5-201ENST00000598980 586 ntBASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PCDHGC4Q9Y5F7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGC4Q9Y5F7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.89■□□□□ 0.3
PCDHGC4Q9Y5F7 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGC4Q9Y5F7 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGC4Q9Y5F7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
PCDHGC4Q9Y5F7 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 RNU1-129P-201ENST00000384064 167 ntBASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 AC140658.5-201ENST00000438532 169 ntBASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 U1.21-201ENST00000580816 167 ntBASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PCDHGC4Q9Y5F7 KRT8P39-201ENST00000396270 1433 ntBASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 AC010327.4-202ENST00000591484 748 ntBASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 AL031055.1-201ENST00000606362 631 ntBASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 AL078644.1-201ENST00000609881 752 ntBASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PCDHGC4Q9Y5F7 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
PCDHGC4Q9Y5F7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.87■□□□□ 0.29
PCDHGC4Q9Y5F7 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.87■□□□□ 0.29
PCDHGC4Q9Y5F7 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGC4Q9Y5F7 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGC4Q9Y5F7 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGC4Q9Y5F7 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PCDHGC4Q9Y5F7 HLA-A-202ENST00000376806 1854 ntBASIC16.87■□□□□ 0.29
PCDHGC4Q9Y5F7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
PCDHGC4Q9Y5F7 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms