Protein–RNA interactions for Protein: Q9Y2K6

USP20, Ubiquitin carboxyl-terminal hydrolase 20, humanhuman

Predictions only

Length 914 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP20Q9Y2K6 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 HCG4-201ENST00000418983 998 ntBASIC18.35■□□□□ 0.53
USP20Q9Y2K6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 AL671277.1-201ENST00000429656 993 ntBASIC18.35■□□□□ 0.53
USP20Q9Y2K6 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 AC112191.1-201ENST00000523689 701 ntBASIC18.35■□□□□ 0.53
USP20Q9Y2K6 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
USP20Q9Y2K6 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 FLJ38576-201ENST00000623820 2459 ntBASIC18.34■□□□□ 0.53
USP20Q9Y2K6 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 AL355306.1-201ENST00000415580 579 ntBASIC18.34■□□□□ 0.53
USP20Q9Y2K6 AP006288.1-201ENST00000446065 395 ntBASIC18.34■□□□□ 0.53
USP20Q9Y2K6 TIMM8BP1-201ENST00000452384 211 ntBASIC18.34■□□□□ 0.53
USP20Q9Y2K6 MTRF1LP2-201ENST00000506027 1122 ntBASIC18.34■□□□□ 0.53
USP20Q9Y2K6 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 AL031055.1-201ENST00000606362 631 ntBASIC18.34■□□□□ 0.53
USP20Q9Y2K6 AC105339.1-204ENST00000636249 355 ntBASIC18.34■□□□□ 0.53
USP20Q9Y2K6 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
USP20Q9Y2K6 SLC9A3P2-201ENST00000447821 2021 ntBASIC18.33■□□□□ 0.53
USP20Q9Y2K6 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP20Q9Y2K6 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
USP20Q9Y2K6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP20Q9Y2K6 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP20Q9Y2K6 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP20Q9Y2K6 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
USP20Q9Y2K6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.33■□□□□ 0.52
USP20Q9Y2K6 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP20Q9Y2K6 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP20Q9Y2K6 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
USP20Q9Y2K6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
USP20Q9Y2K6 AC002056.1-201ENST00000395613 760 ntBASIC18.33■□□□□ 0.52
USP20Q9Y2K6 AC004461.1-201ENST00000412461 403 ntBASIC18.33■□□□□ 0.52
USP20Q9Y2K6 CDK2AP2P3-201ENST00000422476 372 ntBASIC18.33■□□□□ 0.52
USP20Q9Y2K6 AC092474.2-201ENST00000424288 719 ntBASIC18.33■□□□□ 0.52
USP20Q9Y2K6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.33■□□□□ 0.52
USP20Q9Y2K6 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC18.33■□□□□ 0.52
USP20Q9Y2K6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC18.33■□□□□ 0.52
USP20Q9Y2K6 AC027612.4-201ENST00000605371 583 ntBASIC18.33■□□□□ 0.52
USP20Q9Y2K6 AC013467.2-201ENST00000605472 835 ntBASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms