Protein–RNA interactions for Protein: Q9UBX2

DUX4, Double homeobox protein 4, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX4Q9UBX2 CDV3-207ENST00000508481 661 ntTSL 3 BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 AC099336.1-202ENST00000602961 463 ntBASIC14.83□□□□□ -0.04
DUX4Q9UBX2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
DUX4Q9UBX2 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 AC007967.3-201ENST00000434308 558 ntBASIC14.82□□□□□ -0.04
DUX4Q9UBX2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 AC096582.2-201ENST00000510860 516 ntBASIC14.82□□□□□ -0.04
DUX4Q9UBX2 FOSL1P1-201ENST00000511041 816 ntBASIC14.82□□□□□ -0.04
DUX4Q9UBX2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 AC012615.1-201ENST00000565797 1299 ntBASIC14.82□□□□□ -0.04
DUX4Q9UBX2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 MIR3652-201ENST00000579335 131 ntBASIC14.82□□□□□ -0.04
DUX4Q9UBX2 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC14.82□□□□□ -0.04
DUX4Q9UBX2 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.81□□□□□ -0.04
DUX4Q9UBX2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms