Protein–RNA interactions for Protein: Q9P0U4

CXXC1, CXXC-type zinc finger protein 1, humanhuman

Predicted RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1Q9P0U4 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 ACTBP11-201ENST00000436287 1126 ntBASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 SDHAP3-202ENST00000515467 728 ntBASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 AC093726.1-201ENST00000608064 963 ntBASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CXXC1Q9P0U4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 WDR53-204ENST00000433160 887 ntTSL 5 BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 AC104989.1-201ENST00000519711 778 ntBASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 RETN-203ENST00000629642 400 ntTSL 5 BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.77■□□□□ 0.44
CXXC1Q9P0U4 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CXXC1Q9P0U4 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC17.77■□□□□ 0.43
CXXC1Q9P0U4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
CXXC1Q9P0U4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CXXC1Q9P0U4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
CXXC1Q9P0U4 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CXXC1Q9P0U4 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
CXXC1Q9P0U4 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 BCYRN1-201ENST00000418539 200 ntBASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CXXC1Q9P0U4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 MIR1908-201ENST00000410394 80 ntBASIC17.75■□□□□ 0.43
CXXC1Q9P0U4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms