Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 REEP4-207ENST00000523293 913 ntTSL 3 BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 AP005018.1-201ENST00000525475 301 ntBASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 AC004233.3-201ENST00000607794 1269 ntBASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 AL662799.1-202ENST00000614205 422 ntBASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
HOXC10Q9NYD6 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 PCDHB17P-201ENST00000539533 2393 ntBASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 OR6D1P-202ENST00000641007 5290 ntBASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 MTND6P24-201ENST00000440466 518 ntBASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 AC009477.1-201ENST00000452936 217 ntBASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 RNA5SP410-201ENST00000516285 106 ntBASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 AP002490.2-201ENST00000524791 560 ntBASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 CR383656.12-201ENST00000549567 513 ntBASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 AC105021.1-202ENST00000570572 669 ntBASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 SPDYE22P-201ENST00000582158 798 ntBASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 CECR7-204ENST00000609932 568 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HOXC10Q9NYD6 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 PC-204ENST00000524491 1714 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 RPL37AP1-201ENST00000412502 279 ntBASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 VMO1-203ENST00000416307 712 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 GSAP-205ENST00000430584 600 ntTSL 5 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 SPTLC1P1-201ENST00000447199 261 ntBASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 TEX28P1-201ENST00000613479 1221 ntBASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 TEX28P2-201ENST00000617764 1221 ntBASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HOXC10Q9NYD6 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
HOXC10Q9NYD6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms