Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 IGLL3P-201ENST00000412472 434 ntBASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 STARD13-205ENST00000439831 945 ntTSL 2 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 AL513480.1-201ENST00000451731 511 ntBASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 AC096734.2-201ENST00000562054 433 ntBASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 AL645728.2-201ENST00000641974 660 ntBASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
UBQLN4Q9NRR5 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 AC120114.3-201ENST00000611923 658 ntBASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 SNX33P1-201ENST00000592116 1762 ntBASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.41■□□□□ 0.06
UBQLN4Q9NRR5 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN4Q9NRR5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN4Q9NRR5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN4Q9NRR5 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.4■□□□□ 0.06
UBQLN4Q9NRR5 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN4Q9NRR5 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN4Q9NRR5 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC15.4■□□□□ 0.06
UBQLN4Q9NRR5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN4Q9NRR5 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN4Q9NRR5 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN4Q9NRR5 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN4Q9NRR5 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
UBQLN4Q9NRR5 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms