Protein–RNA interactions for Protein: Q9NR12

PDLIM7, PDZ and LIM domain protein 7, humanhuman

Predictions only

Length 457 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7Q9NR12 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PDLIM7Q9NR12 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 RNU1-129P-201ENST00000384064 167 ntBASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 LY6E-204ENST00000519546 971 ntTSL 2 BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 HILS1-202ENST00000545329 423 ntBASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 CDK4-206ENST00000549606 558 ntTSL 2 BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 AC010336.2-201ENST00000564226 506 ntBASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 TP53TG3HP-202ENST00000569755 579 ntBASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 U1.21-201ENST00000580816 167 ntBASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 AL138828.2-201ENST00000615812 383 ntBASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 MIR6799-201ENST00000620297 69 ntBASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PDLIM7Q9NR12 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 REEP4-207ENST00000523293 913 ntTSL 3 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 MIR3909-201ENST00000579518 119 ntBASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 PC-204ENST00000524491 1714 ntTSL 2 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PDLIM7Q9NR12 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDLIM7Q9NR12 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PDLIM7Q9NR12 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDLIM7Q9NR12 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PDLIM7Q9NR12 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.58■□□□□ 0.57
PDLIM7Q9NR12 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 NKG7-205ENST00000600427 520 ntTSL 3 BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 AL031055.1-201ENST00000606362 631 ntBASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
PDLIM7Q9NR12 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 MPI-209ENST00000564003 1195 ntTSL 2 BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 AC018529.1-201ENST00000613063 361 ntBASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 AP001350.2-201ENST00000625104 1094 ntBASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.57■□□□□ 0.56
PDLIM7Q9NR12 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms