Protein–RNA interactions for Protein: Q9NP66

HMG20A, High mobility group protein 20A, humanhuman

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20AQ9NP66 AL157888.1-201ENST00000631930 593 ntBASIC15.31■□□□□ 0.04
HMG20AQ9NP66 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 PBK-203ENST00000522944 1499 ntTSL 2 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
HMG20AQ9NP66 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 OR2I1P-210ENST00000642037 4691 ntBASIC15.3■□□□□ 0.04
HMG20AQ9NP66 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 SLC25A1P3-201ENST00000395415 828 ntBASIC15.3■□□□□ 0.04
HMG20AQ9NP66 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 DUT-205ENST00000558813 769 ntTSL 2 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 SBF1P1-201ENST00000444527 5631 ntBASIC15.3■□□□□ 0.04
HMG20AQ9NP66 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.3■□□□□ 0.04
HMG20AQ9NP66 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 ALOX12P2-203ENST00000570921 1945 ntBASIC15.29■□□□□ 0.04
HMG20AQ9NP66 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 SLC25A3P1-201ENST00000443844 931 ntBASIC15.29■□□□□ 0.04
HMG20AQ9NP66 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC15.29■□□□□ 0.04
HMG20AQ9NP66 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
HMG20AQ9NP66 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms