Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 AC007431.3-201ENST00000623221 587 ntBASIC21.49■■□□□ 1.03
PCDH11YQ9BZA8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11YQ9BZA8 FST-202ENST00000396947 2538 ntTSL 5 BASIC21.49■■□□□ 1.03
PCDH11YQ9BZA8 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11YQ9BZA8 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11YQ9BZA8 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
PCDH11YQ9BZA8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
PCDH11YQ9BZA8 PCDHB17P-201ENST00000539533 2393 ntBASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 TEX48-202ENST00000612244 662 ntTSL 3 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 SLC7A15P-201ENST00000424028 1363 ntBASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 KRT8P12-202ENST00000472924 1397 ntBASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC21.48■■□□□ 1.03
PCDH11YQ9BZA8 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 AL589702.1-201ENST00000641229 1509 ntBASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 PGF-202ENST00000405431 666 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 SPDYE17-201ENST00000412399 783 ntBASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 CD81-207ENST00000481687 890 ntTSL 2 BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 AC055876.2-201ENST00000531834 546 ntBASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 AC026979.3-201ENST00000607315 403 ntBASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
PCDH11YQ9BZA8 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 IMPDH1P4-201ENST00000445028 1534 ntBASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 AC132938.2-201ENST00000579188 680 ntBASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 AL033527.5-202ENST00000641632 1098 ntBASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 AL591163.1-201ENST00000641757 987 ntBASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 AL023806.1-201ENST00000603994 1649 ntBASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 AC067852.2-201ENST00000590513 2313 ntBASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
PCDH11YQ9BZA8 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.45■■□□□ 1.02
PCDH11YQ9BZA8 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms