Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 AC097493.3-201ENST00000509725 367 ntBASIC17.42■□□□□ 0.38
LRRC3Q9BY71 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 AC013467.2-201ENST00000605472 835 ntBASIC17.42■□□□□ 0.38
LRRC3Q9BY71 AL158211.3-201ENST00000607385 239 ntBASIC17.42■□□□□ 0.38
LRRC3Q9BY71 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
LRRC3Q9BY71 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 PP12613-201ENST00000424958 2230 ntBASIC17.41■□□□□ 0.38
LRRC3Q9BY71 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 AL645608.8-201ENST00000606034 2086 ntBASIC17.41■□□□□ 0.38
LRRC3Q9BY71 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 AC105233.2-201ENST00000523697 349 ntBASIC17.41■□□□□ 0.38
LRRC3Q9BY71 AF228730.5-201ENST00000530288 346 ntBASIC17.41■□□□□ 0.38
LRRC3Q9BY71 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 MIR4453-201ENST00000584019 89 ntBASIC17.41■□□□□ 0.38
LRRC3Q9BY71 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
LRRC3Q9BY71 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.4■□□□□ 0.38
LRRC3Q9BY71 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 AC012313.1-201ENST00000593393 3059 ntBASIC17.4■□□□□ 0.38
LRRC3Q9BY71 TUBB8P12-201ENST00000308911 1335 ntBASIC17.4■□□□□ 0.38
LRRC3Q9BY71 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 TUBB7P-202ENST00000428444 1305 ntBASIC17.4■□□□□ 0.38
LRRC3Q9BY71 TUBB8P7-204ENST00000567960 1332 ntBASIC17.4■□□□□ 0.38
LRRC3Q9BY71 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 SNX33P1-201ENST00000592116 1762 ntBASIC17.4■□□□□ 0.38
LRRC3Q9BY71 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 AP3S2-216ENST00000617003 1561 ntBASIC17.4■□□□□ 0.38
LRRC3Q9BY71 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
LRRC3Q9BY71 AC006277.1-201ENST00000624348 1610 ntBASIC17.39■□□□□ 0.38
LRRC3Q9BY71 AL671710.1-201ENST00000610245 2349 ntBASIC17.39■□□□□ 0.38
LRRC3Q9BY71 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC17.39■□□□□ 0.38
LRRC3Q9BY71 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 KRT18P34-201ENST00000488218 1270 ntBASIC17.39■□□□□ 0.37
LRRC3Q9BY71 AC069120.2-201ENST00000524091 540 ntBASIC17.39■□□□□ 0.37
LRRC3Q9BY71 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC17.39■□□□□ 0.37
LRRC3Q9BY71 RN7SL204P-201ENST00000582831 262 ntBASIC17.39■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms