Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 RNU1-129P-201ENST00000384064 167 ntBASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 PMS2P4-201ENST00000412466 1052 ntBASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 LINC01225-203ENST00000563550 1244 ntBASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 U1.21-201ENST00000580816 167 ntBASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 LINC00628-201ENST00000628516 1289 ntBASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRAIPQ9BWF2 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAIPQ9BWF2 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAIPQ9BWF2 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
TRAIPQ9BWF2 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAIPQ9BWF2 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAIPQ9BWF2 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAIPQ9BWF2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
TRAIPQ9BWF2 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 AL592309.1-201ENST00000443127 649 ntBASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 AC087641.1-201ENST00000557561 1021 ntBASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 KRT8P23-201ENST00000560090 1207 ntBASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 AC004449.1-201ENST00000564240 433 ntBASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 MPDU1-223ENST00000582151 728 ntBASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC18.33■□□□□ 0.52
TRAIPQ9BWF2 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 AC069335.1-201ENST00000489972 472 ntBASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 KRT8P49-201ENST00000604166 1432 ntBASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
TRAIPQ9BWF2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAIPQ9BWF2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRAIPQ9BWF2 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
TRAIPQ9BWF2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAIPQ9BWF2 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAIPQ9BWF2 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.31■□□□□ 0.52
TRAIPQ9BWF2 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAIPQ9BWF2 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
TRAIPQ9BWF2 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms