Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
CHRDL1Q9BU40 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
CHRDL1Q9BU40 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC13.4□□□□□ -0.27
CHRDL1Q9BU40 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 SOD2-201ENST00000337404 991 ntTSL 2 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 AL020989.1-201ENST00000422979 469 ntBASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 KRT16P4-201ENST00000453883 522 ntBASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 CYP2T1P-202ENST00000641596 2535 ntBASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
CHRDL1Q9BU40 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 AC092850.2-201ENST00000623821 2697 ntBASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 EGFEM1P-202ENST00000431685 1563 ntBASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 SPDYE21P-201ENST00000413323 827 ntBASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CHRDL1Q9BU40 AC132008.2-207ENST00000454517 770 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms