Protein–RNA interactions for Protein: Q99829

CPNE1, Copine-1, humanhuman

Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1Q99829 AC007950.2-201ENST00000615045 2347 ntBASIC16.78■□□□□ 0.28
CPNE1Q99829 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CPNE1Q99829 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.77■□□□□ 0.28
CPNE1Q99829 AC002310.6-201ENST00000624451 1377 ntBASIC16.77■□□□□ 0.28
CPNE1Q99829 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE1Q99829 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.28
CPNE1Q99829 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
CPNE1Q99829 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE1Q99829 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE1Q99829 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
CPNE1Q99829 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE1Q99829 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE1Q99829 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE1Q99829 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE1Q99829 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE1Q99829 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CPNE1Q99829 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE1Q99829 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE1Q99829 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE1Q99829 LSM5-204ENST00000409909 740 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE1Q99829 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.77■□□□□ 0.28
CPNE1Q99829 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE1Q99829 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.77■□□□□ 0.28
CPNE1Q99829 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.77■□□□□ 0.28
CPNE1Q99829 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.77■□□□□ 0.28
CPNE1Q99829 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.77■□□□□ 0.28
CPNE1Q99829 AC091167.2-201ENST00000579581 588 ntBASIC16.77■□□□□ 0.28
CPNE1Q99829 REXO1L3P-201ENST00000622202 1288 ntBASIC16.77■□□□□ 0.28
CPNE1Q99829 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE1Q99829 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CPNE1Q99829 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CPNE1Q99829 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE1Q99829 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE1Q99829 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.77■□□□□ 0.27
CPNE1Q99829 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE1Q99829 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CPNE1Q99829 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.77■□□□□ 0.27
CPNE1Q99829 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.77■□□□□ 0.27
CPNE1Q99829 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CPNE1Q99829 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE1Q99829 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.77■□□□□ 0.27
CPNE1Q99829 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.77■□□□□ 0.27
CPNE1Q99829 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE1Q99829 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE1Q99829 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE1Q99829 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.77■□□□□ 0.27
CPNE1Q99829 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CPNE1Q99829 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.76■□□□□ 0.27
CPNE1Q99829 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CPNE1Q99829 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE1Q99829 AL031731.1-201ENST00000642131 2094 ntBASIC16.76■□□□□ 0.27
CPNE1Q99829 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE1Q99829 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CPNE1Q99829 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 AL162727.3-201ENST00000635661 2787 ntBASIC16.76■□□□□ 0.27
CPNE1Q99829 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CPNE1Q99829 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CPNE1Q99829 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CPNE1Q99829 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE1Q99829 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE1Q99829 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE1Q99829 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.76■□□□□ 0.27
CPNE1Q99829 SIGLEC29P-201ENST00000599873 1114 ntBASIC16.76■□□□□ 0.27
CPNE1Q99829 MTDHP4-201ENST00000600287 670 ntBASIC16.76■□□□□ 0.27
CPNE1Q99829 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CPNE1Q99829 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.76■□□□□ 0.27
CPNE1Q99829 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE1Q99829 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CPNE1Q99829 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CPNE1Q99829 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CPNE1Q99829 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE1Q99829 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
CPNE1Q99829 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CPNE1Q99829 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.76■□□□□ 0.27
CPNE1Q99829 GGT4P-201ENST00000623672 1708 ntBASIC16.76■□□□□ 0.27
CPNE1Q99829 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CPNE1Q99829 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CPNE1Q99829 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE1Q99829 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.75■□□□□ 0.27
CPNE1Q99829 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CPNE1Q99829 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CPNE1Q99829 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms